Difference between revisions of "FISUC RS00790"
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(Created page with "Category:reaction == Reaction DUTP-PYROP-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.23 ec-3.6.1.23] ** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9] * di...") |
(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4] * direction: ** reversible * common-name: ** su...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction SULFATE-ADENYLYLTRANS-RXN == |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4] |
− | |||
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** sulfate adenylyltransferase subunit cysd |
− | ** | + | ** sulfate adenylyltransferase |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[FSU_RS02630]] | |
− | |||
− | |||
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[FSU_RS02625]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[FISUC_RS00750]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[FISUC_RS00745]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-5340]], sulfate activation for sulfonation: |
− | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
− | * [[PWY- | + | * [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate): |
− | ** ''' | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
− | * [[PWY | + | * [[PWY-6683]], assimilatory sulfate reduction III: |
− | ** '''2''' reactions found over ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY | + | * [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)): |
− | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[SULFMETII-PWY]], assimilatory sulfate reduction II: |
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-5278]], sulfite oxidation III: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
− | |||
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
− | |||
− | |||
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q12650 Q12650] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O33581 O33581] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O34764 O34764] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q10600 Q10600] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O67174 O67174] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P21156 P21156] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O23324 O23324] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P28604 P28604] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q27128 Q27128] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P23845 P23845] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O43252 O43252] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q43170 Q43170] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q43183 Q43183] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q43870 Q43870] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q12555 Q12555] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P08536 P08536] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P74241 P74241] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O48888 O48888] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q39595 Q39595] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q96349 Q96349] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q96541 Q96541] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P13441 P13441] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P13442 P13442] |
− | |||
</div> | </div> | ||
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.7.7.4}} |
− | {{#set: direction= | + | {{#set: direction=reversible}} |
− | {{#set: common-name= | + | {{#set: common-name=sulfate adenylyltransferase subunit cysd|sulfate adenylyltransferase}} |
{{#set: nb gene associated=4}} | {{#set: nb gene associated=4}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=orthofinder|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=genome|bthetaiotaomicron}} |
Revision as of 17:57, 22 September 2020
Contents
Reaction SULFATE-ADENYLYLTRANS-RXN
- ec-number:
- direction:
- reversible
- common-name:
- sulfate adenylyltransferase subunit cysd
- sulfate adenylyltransferase
Reaction formula
Gene(s) associated with this reaction
- Gene: FSU_RS02630
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FSU_RS02625
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FISUC_RS00750
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS00745
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5340, sulfate activation for sulfonation:
- 1 reactions found over 2 reactions in the full pathway
- P224-PWY, dissimilatory sulfate reduction II (to thiosulfate):
- 2 reactions found over 5 reactions in the full pathway
- PWY-6683, assimilatory sulfate reduction III:
- 1 reactions found over 3 reactions in the full pathway
- DISSULFRED-PWY, dissimilatory sulfate reduction I (to hydrogen sufide)):
- 2 reactions found over 4 reactions in the full pathway
- SULFMETII-PWY, assimilatory sulfate reduction II:
- 1 reactions found over 3 reactions in the full pathway
- PWY-5278, sulfite oxidation III:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
External links