Difference between revisions of "FISUC RS08240"

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(Created page with "Category:reaction == Reaction R04560 == * direction: ** reversible == Reaction formula == * 1.0 10-FORMYL-THF[c] '''+''' 1.0 AICAR[c] '''<=>''' 1.0 PHOSPHORIBOSY...")
(Created page with "Category:reaction == Reaction OHMETHYLBILANESYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.61 ec-2.5.1.61] * direction: ** left-to-right * common-name: ** h...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction R04560 ==
+
== Reaction OHMETHYLBILANESYN-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.61 ec-2.5.1.61]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** hydroxymethylbilane synthase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[10-FORMYL-THF]][c] '''+''' 1.0 [[AICAR]][c] '''<=>''' 1.0 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c] '''+''' 1.0 [[THF]][c]
+
* 4 [[PORPHOBILINOGEN]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS01445]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS15255]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_kegg]]; tool: [[curation]]; comment: reaction added to reach 10-formyl-thf
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: nb gene associated=0}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
−
{{#set: reconstruction comment=reaction added to reach 10-formyl-thf}}
+
* UNIPROT:
−
{{#set: reconstruction source=reactions_add_kegg}}
+
** [http://www.uniprot.org/uniprot/Q57989 Q57989]
 +
** [http://www.uniprot.org/uniprot/O29026 O29026]
 +
** [http://www.uniprot.org/uniprot/P64336 P64336]
 +
** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
 +
** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
 +
** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
 +
** [http://www.uniprot.org/uniprot/P28464 P28464]
 +
** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
 +
** [http://www.uniprot.org/uniprot/P56140 P56140]
 +
** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
 +
** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
 +
** [http://www.uniprot.org/uniprot/O26960 O26960]
 +
** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
 +
** [http://www.uniprot.org/uniprot/P06983 P06983]
 +
** [http://www.uniprot.org/uniprot/P13446 P13446]
 +
** [http://www.uniprot.org/uniprot/P08397 P08397]
 +
** [http://www.uniprot.org/uniprot/P22907 P22907]
 +
** [http://www.uniprot.org/uniprot/P19356 P19356]
 +
** [http://www.uniprot.org/uniprot/Q43082 Q43082]
 +
** [http://www.uniprot.org/uniprot/P40129 P40129]
 +
** [http://www.uniprot.org/uniprot/P30527 P30527]
 +
** [http://www.uniprot.org/uniprot/P28789 P28789]
 +
** [http://www.uniprot.org/uniprot/Q60169 Q60169]
 +
** [http://www.uniprot.org/uniprot/Q43316 Q43316]
 +
** [http://www.uniprot.org/uniprot/Q49808 Q49808]
 +
** [http://www.uniprot.org/uniprot/P73660 P73660]
 +
** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
 +
** [http://www.uniprot.org/uniprot/Q09899 Q09899]
 +
** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
 +
</div>
 +
{{#set: ec-number=ec-2.5.1.61}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=hydroxymethylbilane synthase}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome|ecoli}}

Revision as of 07:15, 24 September 2020

Reaction OHMETHYLBILANESYN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • hydroxymethylbilane synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5189, tetrapyrrole biosynthesis II (from glycine):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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