Difference between revisions of "FSU RS08125"

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(Created page with "Category:reaction == Reaction RXN0-2382 == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122] * direction: ** left-to-right == Reaction formula == * 1 ...")
(Created page with "Category:reaction == Reaction RXN0-5240 == * direction: ** reversible == Reaction formula == * 1 D-ALANINE[c] '''+''' 1 PYRIDOXAL_PHOSPHATE[c] '''<=>''' 1 PYRIDO...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-2382 ==
+
== Reaction RXN0-5240 ==
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.2.1.122 ec-4.2.1.122]
 
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[D-ALANINE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''<=>''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[FSU_RS14455]]
* Gene: [[FISUC_RS00915]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS00910]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FSU_RS02790]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
* Gene: [[FSU_RS02795]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26435 26435]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28565 28565]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
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** [http://www.genome.jp/dbget-bin/www_bget?R01147 R01147]
{{#set: ec-number=ec-4.2.1.122}}
+
{{#set: direction=reversible}}
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=orthofinder}}
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=ecoli|genome|bifidobacterium|bthetaiotaomicron}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 07:18, 24 September 2020

Reaction RXN0-5240

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links