Difference between revisions of "FISUC RS06860"

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(Created page with "Category:reaction == Reaction RXN-15043 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51] * direction: ** left-to-right * common-name: ** 1-acyl-sn-gly...")
(Created page with "Category:reaction == Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10] * direction: ** reversible * common-na...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15043 ==
+
== Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 1-acyl-sn-glycerol-3-phosphate acyltransferase
+
** type i 3-dehydroquinate dehydratase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-1-LYSOPHOSPHATIDATE]][c] '''+''' 1 [[OLEOYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-8268]][c]
+
* 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS00315]]
+
* Gene: [[FSU_RS09810]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS07430]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FISUC_RS14120]]
+
* Gene: [[FISUC_RS07880]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS15140]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS05530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS01330]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7417]], phospholipid remodeling (phosphatidate, yeast):
+
* [[PWY-6416]], quinate degradation II:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7411]], phosphatidate biosynthesis (yeast):
+
* [[QUINATEDEG-PWY]], quinate degradation I:
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6707]], gallate biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.3.1.51}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=1-acyl-sn-glycerol-3-phosphate acyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21099 21099]
−
{{#set: nb gene associated=6}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P05195 P05195]
 +
** [http://www.uniprot.org/uniprot/P46380 P46380]
 +
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
 +
** [http://www.uniprot.org/uniprot/P07547 P07547]
 +
** [http://www.uniprot.org/uniprot/P08566 P08566]
 +
** [http://www.uniprot.org/uniprot/P43878 P43878]
 +
** [http://www.uniprot.org/uniprot/P05194 P05194]
 +
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
 +
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
 +
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
 +
** [http://www.uniprot.org/uniprot/P05147 P05147]
 +
** [http://www.uniprot.org/uniprot/P24670 P24670]
 +
** [http://www.uniprot.org/uniprot/P35146 P35146]
 +
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 +
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
 +
** [http://www.uniprot.org/uniprot/P73367 P73367]
 +
** [http://www.uniprot.org/uniprot/O65917 O65917]
 +
</div>
 +
{{#set: ec-number=ec-4.2.1.10}}
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=type i 3-dehydroquinate dehydratase}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=genome|ecoli|plantarum}}

Revision as of 07:18, 24 September 2020

Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • type i 3-dehydroquinate dehydratase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6416, quinate degradation II:
    • 2 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY, quinate degradation I:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6707, gallate biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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