Difference between revisions of "FISUC RS00790"

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(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4] * direction: ** reversible * common-name: ** su...")
(Created page with "Category:reaction == Reaction RFFTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.59 ec-2.6.1.59] * direction: ** reversible * common-name: ** dtdp-4-amino-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFATE-ADENYLYLTRANS-RXN ==
+
== Reaction RFFTRANS-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
+
** [http://enzyme.expasy.org/EC/2.6.1.59 ec-2.6.1.59]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** sulfate adenylyltransferase subunit cysd
+
** dtdp-4-amino-4,6-dideoxygalactose transaminase
−
** sulfate adenylyltransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TDP-D-FUCOSAMINE]][c] '''<=>''' 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS02630]]
+
* Gene: [[FSU_RS12295]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FISUC_RS10335]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FSU_RS02625]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS00750]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS00745]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5340]], sulfate activation for sulfonation:
+
* [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate):
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6683]], assimilatory sulfate reduction III:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5278]], sulfite oxidation III:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04438 R04438]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10368 10368]
−
* LIGAND-RXN:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28631 28631]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
+
{{#set: ec-number=ec-2.6.1.59}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
 
−
** [http://www.uniprot.org/uniprot/O33581 O33581]
 
−
** [http://www.uniprot.org/uniprot/O34764 O34764]
 
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
 
−
** [http://www.uniprot.org/uniprot/P21156 P21156]
 
−
** [http://www.uniprot.org/uniprot/O23324 O23324]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 
−
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 
−
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 
−
** [http://www.uniprot.org/uniprot/P28604 P28604]
 
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 
−
** [http://www.uniprot.org/uniprot/P23845 P23845]
 
−
** [http://www.uniprot.org/uniprot/O43252 O43252]
 
−
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 
−
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 
−
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 
−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
−
** [http://www.uniprot.org/uniprot/P08536 P08536]
 
−
** [http://www.uniprot.org/uniprot/P74241 P74241]
 
−
** [http://www.uniprot.org/uniprot/O48888 O48888]
 
−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
−
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
−
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
−
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
−
** [http://www.uniprot.org/uniprot/P13441 P13441]
 
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
 
−
</div>
 
−
{{#set: ec-number=ec-2.7.7.4}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=sulfate adenylyltransferase subunit cysd|sulfate adenylyltransferase}}
+
{{#set: common-name=dtdp-4-amino-4,6-dideoxygalactose transaminase}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|bthetaiotaomicron}}
+
{{#set: reconstruction source=genome}}

Revision as of 07:18, 24 September 2020

Reaction RFFTRANS-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • dtdp-4-amino-4,6-dideoxygalactose transaminase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7315, dTDP-N-acetylthomosamine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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