Difference between revisions of "FISUC RS08240"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction OHMETHYLBILANESYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.61 ec-2.5.1.61] * direction: ** left-to-right * common-name: ** h...")
(Created page with "Category:reaction == Reaction RXN-14177 == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163] * direction: ** left-to-right == Reaction formula == * 1 ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OHMETHYLBILANESYN-RXN ==
+
== Reaction RXN-14177 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.61 ec-2.5.1.61]
+
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** hydroxymethylbilane synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 4 [[PORPHOBILINOGEN]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
+
* 1 [[CPD-15152]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-15153]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01445]]
+
* Gene: [[FSU_RS11465]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FISUC_RS15255]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26465 26465]
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.1.1.163}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q57989 Q57989]
 
−
** [http://www.uniprot.org/uniprot/O29026 O29026]
 
−
** [http://www.uniprot.org/uniprot/P64336 P64336]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
 
−
** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
 
−
** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
 
−
** [http://www.uniprot.org/uniprot/P28464 P28464]
 
−
** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
 
−
** [http://www.uniprot.org/uniprot/P56140 P56140]
 
−
** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
 
−
** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
 
−
** [http://www.uniprot.org/uniprot/O26960 O26960]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
 
−
** [http://www.uniprot.org/uniprot/P06983 P06983]
 
−
** [http://www.uniprot.org/uniprot/P13446 P13446]
 
−
** [http://www.uniprot.org/uniprot/P08397 P08397]
 
−
** [http://www.uniprot.org/uniprot/P22907 P22907]
 
−
** [http://www.uniprot.org/uniprot/P19356 P19356]
 
−
** [http://www.uniprot.org/uniprot/Q43082 Q43082]
 
−
** [http://www.uniprot.org/uniprot/P40129 P40129]
 
−
** [http://www.uniprot.org/uniprot/P30527 P30527]
 
−
** [http://www.uniprot.org/uniprot/P28789 P28789]
 
−
** [http://www.uniprot.org/uniprot/Q60169 Q60169]
 
−
** [http://www.uniprot.org/uniprot/Q43316 Q43316]
 
−
** [http://www.uniprot.org/uniprot/Q49808 Q49808]
 
−
** [http://www.uniprot.org/uniprot/P73660 P73660]
 
−
** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
 
−
** [http://www.uniprot.org/uniprot/Q09899 Q09899]
 
−
** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
 
−
</div>
 
−
{{#set: ec-number=ec-2.5.1.61}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydroxymethylbilane synthase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|ecoli}}
+
{{#set: reconstruction source=bthetaiotaomicron}}

Revision as of 07:53, 5 October 2020

Reaction RXN-14177

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS08240&oldid=39198"