Difference between revisions of "FSU RS01020"

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(Created page with "Category:reaction == Reaction DCMP-DEAMINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.12 ec-3.5.4.12] * direction: ** left-to-right == Reaction formula ==...")
(Created page with "Category:reaction == Reaction RXN-8765 == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.106 ec-1.3.1.106] * direction: ** left-to-right == Reaction formula == * 1 C...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction DCMP-DEAMINASE-RXN ==
+
== Reaction RXN-8765 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.5.4.12 ec-3.5.4.12]
+
** [http://enzyme.expasy.org/EC/1.3.1.106 ec-1.3.1.106]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DUMP]][c]
+
* 1 [[CPD-9043]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[CPD-9044]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS01440]]
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
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* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
** '''6''' reactions found over '''8''' reactions in the full pathway
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** '''15''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach cpd-691
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22925 22925]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15627 15627]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
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** [http://www.genome.jp/dbget-bin/www_bget?R05812 R05812]
* UNIPROT:
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{{#set: ec-number=ec-1.3.1.106}}
** [http://www.uniprot.org/uniprot/P32321 P32321]
 
** [http://www.uniprot.org/uniprot/P00814 P00814]
 
** [http://www.uniprot.org/uniprot/P16006 P16006]
 
** [http://www.uniprot.org/uniprot/P06773 P06773]
 
** [http://www.uniprot.org/uniprot/O74069 O74069]
 
{{#set: ec-number=ec-3.5.4.12}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to reach cpd-691}}
{{#set: reconstruction source=bthetaiotaomicron|faecalibacterium}}
+
{{#set: reconstruction source=reactions_add_adenosylcobalamin}}

Revision as of 07:55, 5 October 2020

Reaction RXN-8765

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 15 reactions found over 15 reactions in the full pathway

Reconstruction information

External links