Difference between revisions of "FSU RS08165"

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(Created page with "Category:reaction == Reaction THI-P-SYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.3 ec-2.5.1.3] * direction: ** left-to-right * common-name: ** thiamine ph...")
(Created page with "Category:reaction == Reaction RXN-14882 == * direction: ** reversible == Reaction formula == * 1 CPD-15818[c] '''<=>''' 1 D-Ribofuranose[c] == Gene(s) associated w...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction THI-P-SYN-RXN ==
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== Reaction RXN-14882 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.5.1.3 ec-2.5.1.3]
 
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** thiamine phosphate synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THZ-P]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c]
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* 1 [[CPD-15818]][c] '''<=>''' 1 [[D-Ribofuranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS00840]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FISUC_RS14650]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6897]], thiamine salvage II:
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes):
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast):
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7356]], thiamine salvage IV (yeast):
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* category: [[manual]]; source: [[add_spontaneous_reactions]]; tool: [[curation]]; comment: spontaneous reaction
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22329 22329]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03223 R03223]
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{{#set: reconstruction category=manual}}
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* UNIPROT:
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{{#set: reconstruction tool=curation}}
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** [http://www.uniprot.org/uniprot/P41835 P41835]
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{{#set: reconstruction comment=spontaneous reaction}}
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** [http://www.uniprot.org/uniprot/P71350 P71350]
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{{#set: reconstruction source=add_spontaneous_reactions}}
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** [http://www.uniprot.org/uniprot/O25514 O25514]
 
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** [http://www.uniprot.org/uniprot/Q9PNL3 Q9PNL3]
 
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** [http://www.uniprot.org/uniprot/Q9JWI2 Q9JWI2]
 
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** [http://www.uniprot.org/uniprot/Q9ZL01 Q9ZL01]
 
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** [http://www.uniprot.org/uniprot/P30137 P30137]
 
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** [http://www.uniprot.org/uniprot/P39594 P39594]
 
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** [http://www.uniprot.org/uniprot/P40386 P40386]
 
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** [http://www.uniprot.org/uniprot/P72965 P72965]
 
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** [http://www.uniprot.org/uniprot/O48881 O48881]
 
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** [http://www.uniprot.org/uniprot/O34294 O34294]
 
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** [http://www.uniprot.org/uniprot/Q9ZBL5 Q9ZBL5]
 
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{{#set: ec-number=ec-2.5.1.3}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=thiamine phosphate synthase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=plantarum|ecoli|faecalibacterium|bthetaiotaomicron|genome|bifidobacterium}}
 

Revision as of 07:55, 5 October 2020

Reaction RXN-14882

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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