Difference between revisions of "FISUC RS14280"

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(Created page with "Category:reaction == Reaction 3.2.1.37-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.37 ec-3.2.1.37] * direction: ** left-to-right == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction RXN-1961 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.19 ec-6.3.4.19] * direction: ** left-to-right * common-name: ** trna lysidine(...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.1.37-RXN ==
+
== Reaction RXN-1961 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.37 ec-3.2.1.37]
+
** [http://enzyme.expasy.org/EC/6.3.4.19 ec-6.3.4.19]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** trna lysidine(34) synthetase tils
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-4-D-xylooligosaccharides]][c] '''+''' n [[WATER]][c] '''=>''' n [[BETA-D-XYLOSE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Cytidine-34-tRNAIle2]][c] '''+''' 1 [[LYS]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Lysidine-tRNA-Ile2]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS10775]]
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* Gene: [[FISUC_RS13965]]
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** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS00155]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6717]], (1,4)-β-D-xylan degradation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
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* RHEA:
−
** [http://www.uniprot.org/uniprot/P45982 P45982]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43745 43745]
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** [http://www.uniprot.org/uniprot/Q9CFH1 Q9CFH1]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P77713 P77713]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09597 R09597]
−
** [http://www.uniprot.org/uniprot/P94489 P94489]
+
{{#set: ec-number=ec-6.3.4.19}}
−
** [http://www.uniprot.org/uniprot/P45702 P45702]
 
−
** [http://www.uniprot.org/uniprot/P48790 P48790]
 
−
** [http://www.uniprot.org/uniprot/P07129 P07129]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Q6 Q7M0Q6]
 
−
** [http://www.uniprot.org/uniprot/P36906 P36906]
 
−
** [http://www.uniprot.org/uniprot/P49943 P49943]
 
−
** [http://www.uniprot.org/uniprot/O42698 O42698]
 
−
** [http://www.uniprot.org/uniprot/P23552 P23552]
 
−
{{#set: ec-number=ec-3.2.1.37}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=trna lysidine(34) synthetase tils}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 07:55, 5 October 2020

Reaction RXN-1961

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • trna lysidine(34) synthetase tils

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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