Difference between revisions of "FISUC RS03590"

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(Created page with "Category:reaction == Reaction DIHYDRODIPICSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7] * direction: ** left-to-right * common-name: ** 4-hyd...")
(Created page with "Category:reaction == Reaction RXN0-5205 == * ec-number: ** [http://enzyme.expasy.org/EC/7.2.2.12 ec-7.2.2.12] * direction: ** left-to-right == Reaction formula == * 1 AT...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction DIHYDRODIPICSYN-RXN ==
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== Reaction RXN0-5205 ==
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7]
+
** [http://enzyme.expasy.org/EC/7.2.2.12 ec-7.2.2.12]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
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** 4-hydroxy-tetrahydrodipicolinate synthase
 
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* synonymous:
 
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** dihydropicolinate synthetase
 
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** dihydrodipicolinic acid synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
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* 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ZN+2]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ZN+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS03675]]
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* Gene: [[FSU_RS10345]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* Gene: [[FISUC_RS01795]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-2941]], L-lysine biosynthesis II:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-5097]], L-lysine biosynthesis VI:
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-2942]], L-lysine biosynthesis III:
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20622 20622]
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** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
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{{#set: ec-number=ec-7.2.2.12}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P43797 P43797]
 
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** [http://www.uniprot.org/uniprot/O26892 O26892]
 
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** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
 
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** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
 
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** [http://www.uniprot.org/uniprot/P19808 P19808]
 
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** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
 
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** [http://www.uniprot.org/uniprot/O05969 O05969]
 
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** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
 
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** [http://www.uniprot.org/uniprot/Q04796 Q04796]
 
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** [http://www.uniprot.org/uniprot/Q57695 Q57695]
 
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** [http://www.uniprot.org/uniprot/O25657 O25657]
 
−
** [http://www.uniprot.org/uniprot/O67216 O67216]
 
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** [http://www.uniprot.org/uniprot/O29352 O29352]
 
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** [http://www.uniprot.org/uniprot/O84366 O84366]
 
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** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
 
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** [http://www.uniprot.org/uniprot/P63945 P63945]
 
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** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
 
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** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
 
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** [http://www.uniprot.org/uniprot/Q43038 Q43038]
 
−
** [http://www.uniprot.org/uniprot/P49423 P49423]
 
−
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
 
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** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
 
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** [http://www.uniprot.org/uniprot/Q42948 Q42948]
 
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** [http://www.uniprot.org/uniprot/Q42940 Q42940]
 
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** [http://www.uniprot.org/uniprot/O86841 O86841]
 
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** [http://www.uniprot.org/uniprot/P24847 P24847]
 
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** [http://www.uniprot.org/uniprot/P24846 P24846]
 
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</div>
 
−
{{#set: ec-number=ec-4.3.3.7}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=4-hydroxy-tetrahydrodipicolinate synthase}}
+
{{#set: nb gene associated=1}}
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{{#set: synonymous=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
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{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=2}}
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{{#set: reconstruction category=orthology}}
−
{{#set: nb pathway associated=4}}
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{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 07:56, 5 October 2020

Reaction RXN0-5205

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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