Difference between revisions of "FSU RS00725"

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(Created page with "Category:reaction == Reaction RXN0-2142 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100] * direction: ** left-to-right * common-name: ** 3-oxoacyl-[...")
(Created page with "Category:reaction == Reaction HOMOSERKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39] * direction: ** left-to-right == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-2142 ==
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== Reaction HOMOSERKIN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
 
−
** 3-oxoacyl-acp reductase fabg
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[HOMO-SER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01260]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FISUC_RS10110]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FISUC_RS15070]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FSU_RS12065]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7858]], (5Z)-dodecenoate biosynthesis II:
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* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis:
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** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
+
* [[PWY-702]], L-methionine biosynthesis II (plants):
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** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-1.1.1.100}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P27722 P27722]
 +
** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
 +
** [http://www.uniprot.org/uniprot/P04948 P04948]
 +
** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
 +
** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
 +
** [http://www.uniprot.org/uniprot/P44504 P44504]
 +
** [http://www.uniprot.org/uniprot/P52991 P52991]
 +
** [http://www.uniprot.org/uniprot/P00547 P00547]
 +
** [http://www.uniprot.org/uniprot/P07128 P07128]
 +
** [http://www.uniprot.org/uniprot/P17423 P17423]
 +
** [http://www.uniprot.org/uniprot/P73646 P73646]
 +
{{#set: ec-number=ec-2.7.1.39}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-acp reductase fabg}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=4}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gap-filling}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=reactions_add_gp}}

Revision as of 07:56, 5 October 2020

Reaction HOMOSERKIN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-THRESYN-PWY, L-threonine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II (plants):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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