Difference between revisions of "FSU RS14305"

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(Created page with "Category:reaction == Reaction RXN-14372 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18] * direction: ** left-to-right * common-name: ** 1,4-alpha-glu...")
(Created page with "Category:reaction == Reaction 6PGLUCONDEHYDROG-RXN == * common-name: ** phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating] * ec-number: ** [http://enzyme....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14372 ==
+
== Reaction 6PGLUCONDEHYDROG-RXN ==
 +
* common-name:
 +
** phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating]
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18]
+
** [http://enzyme.expasy.org/EC/1.1.1.351 ec-1.1.1.351]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* synonymous:
−
** 1,4-alpha-glucan branching protein glgb
+
** 6pgd
 +
** 6-phosphogluconic dehydrogenase
 +
** 6-phosphogluconic carboxylase
 +
** phosphogluconic acid dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* n [[Alpha-Amyloses]][c] '''=>''' n [[CPD-7043]][c]
+
* 1 [[CPD-2961]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[RIBULOSE-5P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS15575]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS01770]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-622]], starch biosynthesis:
+
* [[P122-PWY]], heterolactic fermentation:
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''17''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_ibrahim_26082020]]; tool: [[curation]]; comment: added to improve flux in sugars
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.4.1.18}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10117 10117]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P14332 P14332]
 +
** [http://www.uniprot.org/uniprot/P31072 P31072]
 +
** [http://www.uniprot.org/uniprot/Q9CDN4 Q9CDN4]
 +
** [http://www.uniprot.org/uniprot/P47506 P47506]
 +
** [http://www.uniprot.org/uniprot/Q9JWS3 Q9JWS3]
 +
** [http://www.uniprot.org/uniprot/P43774 P43774]
 +
** [http://www.uniprot.org/uniprot/P12013 P12013]
 +
** [http://www.uniprot.org/uniprot/P41576 P41576]
 +
** [http://www.uniprot.org/uniprot/P00350 P00350]
 +
** [http://www.uniprot.org/uniprot/P00349 P00349]
 +
** [http://www.uniprot.org/uniprot/P52209 P52209]
 +
** [http://www.uniprot.org/uniprot/P41581 P41581]
 +
** [http://www.uniprot.org/uniprot/P41582 P41582]
 +
** [http://www.uniprot.org/uniprot/Q59275 Q59275]
 +
** [http://www.uniprot.org/uniprot/P41583 P41583]
 +
** [http://www.uniprot.org/uniprot/Q60254 Q60254]
 +
** [http://www.uniprot.org/uniprot/P37754 P37754]
 +
** [http://www.uniprot.org/uniprot/Q59410 Q59410]
 +
** [http://www.uniprot.org/uniprot/P52207 P52207]
 +
** [http://www.uniprot.org/uniprot/P70718 P70718]
 +
** [http://www.uniprot.org/uniprot/Q7M451 Q7M451]
 +
** [http://www.uniprot.org/uniprot/P41572 P41572]
 +
** [http://www.uniprot.org/uniprot/P14062 P14062]
 +
** [http://www.uniprot.org/uniprot/P21577 P21577]
 +
** [http://www.uniprot.org/uniprot/P38720 P38720]
 +
** [http://www.uniprot.org/uniprot/Q40311 Q40311]
 +
** [http://www.uniprot.org/uniprot/P53319 P53319]
 +
** [http://www.uniprot.org/uniprot/O81237 O81237]
 +
** [http://www.uniprot.org/uniprot/O81238 O81238]
 +
** [http://www.uniprot.org/uniprot/O81239 O81239]
 +
** [http://www.uniprot.org/uniprot/O22111 O22111]
 +
** [http://www.uniprot.org/uniprot/Q17761 Q17761]
 +
** [http://www.uniprot.org/uniprot/O32911 O32911]
 +
</div>
 +
{{#set: common-name=phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating]}}
 +
{{#set: ec-number=ec-1.1.1.351}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1,4-alpha-glucan branching protein glgb}}
+
{{#set: synonymous=6-phosphogluconic dehydrogenase|6-phosphogluconic carboxylase|phosphogluconic acid dehydrogenase|6pgd}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to improve flux in sugars}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=reactions_add_ibrahim_26082020}}

Revision as of 07:56, 5 October 2020

Reaction 6PGLUCONDEHYDROG-RXN

  • common-name:
    • phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating]
  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • 6pgd
    • 6-phosphogluconic dehydrogenase
    • 6-phosphogluconic carboxylase
    • phosphogluconic acid dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P122-PWY, heterolactic fermentation:
    • 17 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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