Difference between revisions of "FSU RS07065"

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(Created page with "Category:reaction == Reaction UDPNACETYLGLUCOSAMACYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.129 ec-2.3.1.129] * direction: ** left-to-right * commo...")
(Created page with "Category:reaction == Reaction RXN0-5462 == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1] ** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2] ** [http://...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UDPNACETYLGLUCOSAMACYLTRANS-RXN ==
+
== Reaction RXN0-5462 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.129 ec-2.3.1.129]
+
** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1]
 +
** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2]
 +
** [http://enzyme.expasy.org/EC/3.6.5.3 ec-3.6.5.3]
 +
** [http://enzyme.expasy.org/EC/3.6.5.4 ec-3.6.5.4]
 +
** [http://enzyme.expasy.org/EC/3.6.5.5 ec-3.6.5.5]
 +
** [http://enzyme.expasy.org/EC/3.6.5.6 ec-3.6.5.6]
 +
** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acyl-acp--udp-n-acetylglucosamine o-acyltransferase
+
** gtpase hflx
 +
** ribosome small subunit-dependent gtpase a
 +
** gtpase
 +
** gtpase obge
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[UDP-OHMYR-ACETYLGLUCOSAMINE]][c]
+
* 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS07620]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[FSU_RS01580]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS09545]]
+
* Gene: [[FSU_RS03610]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FSU_RS03025]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS12070]]
+
* Gene: [[FISUC_RS01145]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS00240]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS15385]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS01730]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS02110]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13926 13926]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19670 19670]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04567 R04567]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00335 R00335]
−
* UNIPROT:
+
{{#set: ec-number=ec-3.6.5.6|ec-3.6.5.3|ec-3.6.5.4|ec-3.6.5.2|ec-3.6.1.15|ec-3.6.5.5|ec-3.6.5.1}}
−
** [http://www.uniprot.org/uniprot/Q9PIM1 Q9PIM1]
 
−
** [http://www.uniprot.org/uniprot/Q9JX26 Q9JX26]
 
−
** [http://www.uniprot.org/uniprot/P43887 P43887]
 
−
** [http://www.uniprot.org/uniprot/P32200 P32200]
 
−
** [http://www.uniprot.org/uniprot/P32201 P32201]
 
−
** [http://www.uniprot.org/uniprot/P0A722 P0A722]
 
−
{{#set: ec-number=ec-2.3.1.129}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acyl-acp--udp-n-acetylglucosamine o-acyltransferase}}
+
{{#set: common-name=gtpase obge|ribosome small subunit-dependent gtpase a|gtpase|gtpase hflx}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|ecoli|bthetaiotaomicron}}
+
{{#set: reconstruction source=genome|ecoli}}

Revision as of 07:56, 5 October 2020

Reaction RXN0-5462

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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