Difference between revisions of "FISUC RS06860"

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(Created page with "Category:reaction == Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10] * direction: ** reversible * common-na...")
(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4] * direction: ** left-to-right * common-name: ** aspartat...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN ==
+
== Reaction ASPARTATEKIN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10]
+
** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** type i 3-dehydroquinate dehydratase
+
** aspartate kinase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS09810]]
+
* Gene: [[FISUC_RS06845]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS08755]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FISUC_RS07880]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6416]], quinate degradation II:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-2941]], L-lysine biosynthesis II:
−
* [[QUINATEDEG-PWY]], quinate degradation I:
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6559]], spermidine biosynthesis II:
−
* [[PWY-6707]], gallate biosynthesis:
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-5097]], L-lysine biosynthesis VI:
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7153]], grixazone biosynthesis:
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[P101-PWY]], ectoine biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6562]], norspermidine biosynthesis:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7977]], L-methionine biosynthesis IV (archaea):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6160]], 3-dehydroquinate biosynthesis II (archaea):
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
Line 35: Line 53:
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21099 21099]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P05195 P05195]
+
** [http://www.uniprot.org/uniprot/P08495 P08495]
−
** [http://www.uniprot.org/uniprot/P46380 P46380]
+
** [http://www.uniprot.org/uniprot/P44505 P44505]
−
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
+
** [http://www.uniprot.org/uniprot/P27725 P27725]
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
−
** [http://www.uniprot.org/uniprot/P43878 P43878]
+
** [http://www.uniprot.org/uniprot/P00561 P00561]
−
** [http://www.uniprot.org/uniprot/P05194 P05194]
+
** [http://www.uniprot.org/uniprot/P00562 P00562]
−
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
+
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
−
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
+
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
−
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
+
** [http://www.uniprot.org/uniprot/P53553 P53553]
−
** [http://www.uniprot.org/uniprot/P05147 P05147]
+
** [http://www.uniprot.org/uniprot/P10869 P10869]
−
** [http://www.uniprot.org/uniprot/P24670 P24670]
+
** [http://www.uniprot.org/uniprot/P08660 P08660]
−
** [http://www.uniprot.org/uniprot/P35146 P35146]
+
** [http://www.uniprot.org/uniprot/P26512 P26512]
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
+
** [http://www.uniprot.org/uniprot/P37142 P37142]
−
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
+
** [http://www.uniprot.org/uniprot/P41403 P41403]
−
** [http://www.uniprot.org/uniprot/P73367 P73367]
+
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
+
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 +
** [http://www.uniprot.org/uniprot/P49079 P49079]
 +
** [http://www.uniprot.org/uniprot/P49080 P49080]
 +
** [http://www.uniprot.org/uniprot/P93402 P93402]
 +
** [http://www.uniprot.org/uniprot/O81852 O81852]
 +
** [http://www.uniprot.org/uniprot/O63067 O63067]
 +
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
</div>
 
</div>
−
{{#set: ec-number=ec-4.2.1.10}}
+
{{#set: ec-number=ec-2.7.2.4}}
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=type i 3-dehydroquinate dehydratase}}
+
{{#set: common-name=aspartate kinase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=11}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|ecoli|plantarum}}
+
{{#set: reconstruction source=plantarum|genome|bthetaiotaomicron|ecoli}}

Revision as of 07:57, 5 October 2020

Reaction ASPARTATEKIN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • aspartate kinase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6559, spermidine biosynthesis II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7153, grixazone biosynthesis:
    • 2 reactions found over 8 reactions in the full pathway
  • P101-PWY, ectoine biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • HOMOSERSYN-PWY, L-homoserine biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6562, norspermidine biosynthesis:
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7977, L-methionine biosynthesis IV (archaea):
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6160, 3-dehydroquinate biosynthesis II (archaea):
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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