Difference between revisions of "FSU RS15580"

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(Created page with "Category:reaction == Reaction TRYPTOPHAN--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2] * direction: ** left-to-right * common-name:...")
(Created page with "Category:reaction == Reaction 3.5.5.1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase ==...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRYPTOPHAN--TRNA-LIGASE-RXN ==
+
== Reaction 3.5.5.1-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2]
+
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tryptophan--trna ligase
+
** nitrilase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[Nitriles]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[Carboxylates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS02435]]
+
* Gene: [[FISUC_RS02085]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS04325]]
+
* Gene: [[FSU_RS03965]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24081 24081]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21724 21724]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00540 R00540]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23381 P23381]
+
** [http://www.uniprot.org/uniprot/P10045 P10045]
−
** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
+
** [http://www.uniprot.org/uniprot/P20960 P20960]
−
** [http://www.uniprot.org/uniprot/O84589 O84589]
+
** [http://www.uniprot.org/uniprot/Q59329 Q59329]
−
** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
+
** [http://www.uniprot.org/uniprot/P32961 P32961]
−
** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
+
** [http://www.uniprot.org/uniprot/P32962 P32962]
−
** [http://www.uniprot.org/uniprot/P43835 P43835]
+
** [http://www.uniprot.org/uniprot/Q55949 Q55949]
−
** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
+
** [http://www.uniprot.org/uniprot/Q42965 Q42965]
−
** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
+
** [http://www.uniprot.org/uniprot/Q42966 Q42966]
−
** [http://www.uniprot.org/uniprot/O26352 O26352]
+
** [http://www.uniprot.org/uniprot/Q23384 Q23384]
−
** [http://www.uniprot.org/uniprot/O51038 O51038]
+
** [http://www.uniprot.org/uniprot/P46010 P46010]
−
** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
+
** [http://www.uniprot.org/uniprot/O04907 O04907]
−
** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
+
** [http://www.uniprot.org/uniprot/P46011 P46011]
−
** [http://www.uniprot.org/uniprot/Q58810 Q58810]
+
{{#set: ec-number=ec-3.5.5.1}}
−
** [http://www.uniprot.org/uniprot/O83640 O83640]
 
−
** [http://www.uniprot.org/uniprot/P67590 P67590]
 
−
** [http://www.uniprot.org/uniprot/O67115 O67115]
 
−
** [http://www.uniprot.org/uniprot/P47372 P47372]
 
−
** [http://www.uniprot.org/uniprot/P32921 P32921]
 
−
** [http://www.uniprot.org/uniprot/Q12109 Q12109]
 
−
** [http://www.uniprot.org/uniprot/Q49901 Q49901]
 
−
** [http://www.uniprot.org/uniprot/P75510 P75510]
 
−
** [http://www.uniprot.org/uniprot/O42875 O42875]
 
−
** [http://www.uniprot.org/uniprot/O96771 O96771]
 
−
** [http://www.uniprot.org/uniprot/P17248 P17248]
 
−
** [http://www.uniprot.org/uniprot/P21656 P21656]
 
−
** [http://www.uniprot.org/uniprot/P04803 P04803]
 
−
** [http://www.uniprot.org/uniprot/P00954 P00954]
 
−
</div>
 
−
{{#set: ec-number=ec-6.1.1.2}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tryptophan--trna ligase}}
+
{{#set: common-name=nitrilase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 07:57, 5 October 2020

Reaction 3.5.5.1-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • nitrilase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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