Difference between revisions of "FSU RS12980"

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(Created page with "Category:reaction == Reaction MHPCHYDROL-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.7.1.14 ec-3.7.1.14] * direction: ** left-to-right == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction ExchangeSeed-PPI == * direction: ** reversible == Reaction formula == * 1.0 PPI[C-BOUNDARY] '''<=>''' 1.0 PPI[e] == Gene(s) associate...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction MHPCHYDROL-RXN ==
+
== Reaction ExchangeSeed-PPI ==
* ec-number:
 
** [http://enzyme.expasy.org/EC/3.7.1.14 ec-3.7.1.14]
 
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-157]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14447]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1.0 [[PPI]][C-BOUNDARY] '''<=>''' 1.0 [[PPI]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS14150]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[HCAMHPDEG-PWY]], 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate:
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R02603 R02603]
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-3.7.1.14}}
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{{#set: nb pathway associated=0}}
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=present in the orthology part of the emile network.}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 07:57, 5 October 2020

Reaction ExchangeSeed-PPI

  • direction:
    • reversible

Reaction formula

  • 1.0 PPI[C-BOUNDARY] <=> 1.0 PPI[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links