Difference between revisions of "FISUC RS11460"

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(Created page with "Category:reaction == Reaction DUDPKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6] * direction: ** left-to-right * common-name: ** nucleoside-di...")
(Created page with "Category:reaction == Reaction AKBLIG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.29 ec-2.3.1.29] * direction: ** reversible == Reaction formula == * 1 ACET...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DUDPKIN-RXN ==
+
== Reaction AKBLIG-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/2.3.1.29 ec-2.3.1.29]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** nucleoside-diphosphate kinase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DUDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[GLY]][c] '''<=>''' 1 [[AMINO-OXOBUT]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS15240]]
+
* Gene: [[FSU_RS01045]]
−
** Category: [[orthology]]
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FSU_RS14500]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS12530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
+
* [[THREONINE-DEG2-PWY]], L-threonine degradation II:
−
** '''11''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00371 R00371]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00370 R00370]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28583 28583]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20736 20736]
−
* LIGAND-RXN:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
+
** [http://www.uniprot.org/uniprot/Q9RRY6 Q9RRY6]
−
{{#set: ec-number=ec-2.7.4.6}}
+
** [http://www.uniprot.org/uniprot/O58030 O58030]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/Q9UY32 Q9UY32]
−
{{#set: common-name=nucleoside-diphosphate kinase}}
+
** [http://www.uniprot.org/uniprot/O31777 O31777]
−
{{#set: nb gene associated=3}}
+
** [http://www.uniprot.org/uniprot/Q22768 Q22768]
−
{{#set: nb pathway associated=3}}
+
** [http://www.uniprot.org/uniprot/P0AB77 P0AB77]
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: ec-number=ec-2.3.1.29}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|plantarum|bthetaiotaomicron|ecoli}}
+
{{#set: reconstruction source=bthetaiotaomicron|ecoli}}

Revision as of 07:57, 5 October 2020

Reaction AKBLIG-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • THREONINE-DEG2-PWY, L-threonine degradation II:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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