Difference between revisions of "FSU RS06720"

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(Created page with "Category:reaction == Reaction RXN-15025 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.cc ec-2.3.1.cc] * direction: ** left-to-right == Reaction formula == * 1 Hi...")
(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6] ** [http://enzyme.expasy.org/EC/2.6.1....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15025 ==
+
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.cc ec-2.3.1.cc]
+
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
 +
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** branched-chain amino acid aminotransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Histone-Acetyl-Lysine]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14762]][c] '''+''' 1 [[Histone-L-lysine]][c] '''+''' 1 [[NIACINAMIDE]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS08385]]
+
* Gene: [[FISUC_RS03245]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS05135]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-4107]], NAD salvage pathway V (PNC V cycle):
+
* [[LEU-DEG2-PWY]], L-leucine degradation I:
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5076]], L-leucine degradation III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7767]], L-leucine degradation IV (Stickland reaction):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.3.1.cc}}
+
* RHEA:
−
{{#set: direction=left-to-right}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
−
{{#set: nb gene associated=1}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
−
{{#set: reconstruction category=manual}}
+
* UNIPROT:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
** [http://www.uniprot.org/uniprot/P38891 P38891]
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
** [http://www.uniprot.org/uniprot/P47176 P47176]
 +
** [http://www.uniprot.org/uniprot/O86505 O86505]
 +
** [http://www.uniprot.org/uniprot/O14370 O14370]
 +
** [http://www.uniprot.org/uniprot/O32954 O32954]
 +
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 +
{{#set: ec-number=ec-2.6.1.42|ec-2.6.1.6}}
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=branched-chain amino acid aminotransferase}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=bifidobacterium|ecoli|faecalibacterium|genome|bthetaiotaomicron|plantarum}}

Revision as of 07:57, 5 October 2020

Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • branched-chain amino acid aminotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LEU-DEG2-PWY, L-leucine degradation I:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5076, L-leucine degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7767, L-leucine degradation IV (Stickland reaction):
    • 1 reactions found over 5 reactions in the full pathway
  • LEUSYN-PWY, L-leucine biosynthesis:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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