Difference between revisions of "FSU RS06065"
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(Created page with "Category:reaction == Reaction RXN-14160 == * common-name: ** glycerophosphorylethanolamine phosphodiesterase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.46 ec-3.1.4...") |
(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27] * direction: ** reversible == Reaction...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27] |
| − | |||
* direction: | * direction: | ||
| − | ** | + | ** reversible |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FSU_RS14145]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria): |
| − | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| + | * [[PWY-581]], indole-3-acetate biosynthesis II: | ||
| + | ** '''2''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWY-8017]], L-tryptophan degradation XIII (Stickland reaction): | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol): | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate): | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | |||
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096] |
| − | + | * LIGAND-RXN: | |
| − | {{#set: ec-number=ec- | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684] |
| − | {{#set: direction= | + | {{#set: ec-number=ec-2.6.1.27}} |
| + | {{#set: direction=reversible}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=orthofinder}} | {{#set: reconstruction tool=orthofinder}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=plantarum | + | {{#set: reconstruction source=plantarum}} |
Revision as of 07:57, 5 October 2020
Contents
Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN
- ec-number:
- direction:
- reversible
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 TRP[c] <=> 1 GLT[c] + 1 INDOLE_PYRUVATE[c]
Gene(s) associated with this reaction
- Gene: FSU_RS14145
- Category: orthology
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- TRPIAACAT-PWY, indole-3-acetate biosynthesis VI (bacteria):
- 1 reactions found over 3 reactions in the full pathway
- PWY-581, indole-3-acetate biosynthesis II:
- 2 reactions found over 12 reactions in the full pathway
- PWY-8017, L-tryptophan degradation XIII (Stickland reaction):
- 2 reactions found over 5 reactions in the full pathway
- PWY-5081, L-tryptophan degradation VIII (to tryptophol):
- 2 reactions found over 4 reactions in the full pathway
- TRPKYNCAT-PWY, L-tryptophan degradation IV (via indole-3-lactate):
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: plantarum; tool: orthofinder; comment: n.a
External links
