Difference between revisions of "DADP"

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(Created page with "Category:gene == Gene FISUC_RS14770 == * common-name: ** carb * transcription-direction: ** positive * centisome-position: ** 94.27541 * left-end-position: ** 3622660...")
(Created page with "Category:gene == Gene FSU_RS05795 == * transcription-direction: ** negative * centisome-position: ** 36.20673 * left-end-position: ** 1391426 * right-end-position: **...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene FISUC_RS14770 ==
+
== Gene FSU_RS05795 ==
−
* common-name:
 
−
** carb
 
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* centisome-position:
 
* centisome-position:
−
** 94.27541    
+
** 36.20673    
 
* left-end-position:
 
* left-end-position:
−
** 3622660
+
** 1391426
 
* right-end-position:
 
* right-end-position:
−
** 3625923
+
** 1392565
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_05102020]]
+
* [[fibrobacter_07102020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBPSYN-RXN]]
+
* [[DTDPGLUCDEHYDRAT-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13202]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16909]]
 
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16910]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-7791]]
+
* [[PWY-7814]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5686]]
+
* [[PWY-6974]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7790]]
+
* [[PWY-7440]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5154]]
+
* [[PWY-6953]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[ARGSYN-PWY]]
+
* [[PWY-7318]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7400]]
+
* [[PWY-7315]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY490-4]]
 
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5921]]
+
* [[PWY-7104]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7688]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6973]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7414]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7312]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6976]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7657]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6808]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6942]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[DTDPRHAMSYN-PWY]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7413]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7316]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
* [[PWY-7301]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[GLUTAMINDEG-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-4984]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7693]]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY0-41]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[CITRULLINE-DEG-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
</div>
 
</div>
−
{{#set: common-name=carb}}
+
{{#set: transcription-direction=negative}}
−
{{#set: transcription-direction=positive}}
+
{{#set: centisome-position=36.20673   }}
−
{{#set: centisome-position=94.27541   }}
+
{{#set: left-end-position=1391426}}
−
{{#set: left-end-position=3622660}}
+
{{#set: right-end-position=1392565}}
−
{{#set: right-end-position=3625923}}
+
{{#set: organism associated=fibrobacter_07102020}}
−
{{#set: organism associated=fibrobacter_05102020}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb pathway associated=19}}
−
{{#set: nb pathway associated=15}}
 

Revision as of 06:52, 9 October 2020

Gene FSU_RS05795

  • transcription-direction:
    • negative
  • centisome-position:
    • 36.20673
  • left-end-position:
    • 1391426
  • right-end-position:
    • 1392565

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7814
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6974
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7440
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6953
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7318
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7315
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7104
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7688
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6973
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7414
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7312
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6976
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7657
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6808
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6942
    • 3 reactions found over 6 reactions in the full pathway
  • DTDPRHAMSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7413
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7316
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7301
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=DADP&oldid=41858"