Difference between revisions of "FSU RS08125"

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(Created page with "Category:reaction == Reaction 2-DEHYDROPANTOATE-REDUCT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169] * direction: ** left-to-right * common-n...")
(Created page with "Category:reaction == Reaction PYRIMSYN1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.99.17 ec-4.1.99.17] * direction: ** left-to-right * common-name: ** phospho...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2-DEHYDROPANTOATE-REDUCT-RXN ==
+
== Reaction PYRIMSYN1-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169]
+
** [http://enzyme.expasy.org/EC/4.1.99.17 ec-4.1.99.17]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-dehydropantoate 2-reductase
+
** phosphomethylpyrimidine synthase thic
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-PANTOATE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[MET]][c] '''+''' 3 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS06490]]
+
* Gene: [[FSU_RS04020]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS04600]]
+
* Gene: [[FISUC_RS02135]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS03445]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6654]], phosphopantothenate biosynthesis III (archaebacteria):
+
* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16235 16235]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24841 24841]
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-4.1.99.17}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02472 R02472]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9CFY8 Q9CFY8]
 
−
** [http://www.uniprot.org/uniprot/Q9V0N0 Q9V0N0]
 
−
{{#set: ec-number=ec-1.1.1.169}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-dehydropantoate 2-reductase}}
+
{{#set: common-name=phosphomethylpyrimidine synthase thic}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|bthetaiotaomicron|ecoli}}
+
{{#set: reconstruction source=genome}}

Revision as of 07:12, 9 October 2020

Reaction PYRIMSYN1-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • phosphomethylpyrimidine synthase thic

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6890, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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