Difference between revisions of "FSU RS09970"

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(Created page with "Category:reaction == Reaction RXN-12864 == * common-name: ** painter reaction * direction: ** left-to-right == Reaction formula == * 4 GLUTATHIONE[c] '''+''' 2 PROTO...")
(Created page with "Category:reaction == Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.23 ec-2.6.1.23] * direction: ** reversible == R...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-12864 ==
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== Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN ==
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* common-name:
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* ec-number:
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** painter reaction
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** [http://enzyme.expasy.org/EC/2.6.1.23 ec-2.6.1.23]
 
* direction:
 
* direction:
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** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 4 [[GLUTATHIONE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SELENITE]][c] '''=>''' 1 [[CPD-13908]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c] '''+''' 3 [[WATER]][c]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ERYTHRO-4-HYDROXY-GLUTAMATE]][c] '''<=>''' 1 [[CPD-15015]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS14145]]
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** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS02470]]
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** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS13690]]
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6932]], selenate reduction:
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* [[HYDROXYPRODEG-PWY]], trans-4-hydroxy-L-proline degradation I:
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** '''2''' reactions found over '''5''' reactions in the full pathway
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[manual]]; source: [[add_spontaneous_reactions]]; tool: [[curation]]; comment: spontaneous reaction
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34904 34904]
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** [http://www.genome.jp/dbget-bin/www_bget?R03266 R03266]
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{{#set: common-name=painter reaction}}
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{{#set: ec-number=ec-2.6.1.23}}
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{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
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{{#set: nb gene associated=0}}
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{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction tool=orthofinder}}
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{{#set: reconstruction comment=spontaneous reaction}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=add_spontaneous_reactions}}
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{{#set: reconstruction source=faecalibacterium|bthetaiotaomicron|plantarum}}

Revision as of 07:12, 9 October 2020

Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HYDROXYPRODEG-PWY, trans-4-hydroxy-L-proline degradation I:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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