Difference between revisions of "FSU RS15580"
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(Created page with "Category:reaction == Reaction 3.5.5.1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase ==...") |
(Created page with "Category:reaction == Reaction ACONITATEHYDR-RXN == * common-name: ** cis-aconitate hydratase ** aconitate hydratase * direction: ** reversible == Reaction formula == * 1 [...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ACONITATEHYDR-RXN == |
− | * | + | * common-name: |
− | ** | + | ** cis-aconitate hydratase |
+ | ** aconitate hydratase | ||
* direction: | * direction: | ||
− | ** | + | ** reversible |
− | |||
− | |||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[FISUC_RS00920]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[FSU_RS02800]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[GLYOXYLATE-BYPASS]], glyoxylate cycle: | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6549]], L-glutamine biosynthesis III: | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6728]], methylaspartate cycle: | ||
+ | ** '''9''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[P23-PWY]], reductive TCA cycle I: | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7124]], ethylene biosynthesis V (engineered): | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5392]], reductive TCA cycle II: | ||
+ | ** '''8''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[TCA]], TCA cycle I (prokaryotic): | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7254]], TCA cycle VII (acetate-producers): | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5690]], TCA cycle II (plants and fungi): | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY66-398]], TCA cycle III (animals): | ||
+ | ** '''8''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[REDCITCYC]], TCA cycle VIII (Helicobacter): | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): | ||
+ | ** '''9''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): | ||
+ | ** '''8''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[FERMENTATION-PWY]], mixed acid fermentation: | ||
+ | ** '''14''' reactions found over '''16''' reactions in the full pathway | ||
+ | </div> | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22147 22147] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900] |
− | + | {{#set: common-name=aconitate hydratase|cis-aconitate hydratase}} | |
− | + | {{#set: direction=reversible}} | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | {{#set: | ||
− | {{#set: direction= | ||
− | |||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=15}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=genome}} | {{#set: reconstruction source=genome}} |
Revision as of 07:12, 9 October 2020
Contents
Reaction ACONITATEHYDR-RXN
- common-name:
- cis-aconitate hydratase
- aconitate hydratase
- direction:
- reversible
Reaction formula
- 1 CIS-ACONITATE[c] + 1 WATER[c] <=> 1 THREO-DS-ISO-CITRATE[c]
Gene(s) associated with this reaction
- Gene: FISUC_RS00920
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FSU_RS02800
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- GLYOXYLATE-BYPASS, glyoxylate cycle:
- 4 reactions found over 6 reactions in the full pathway
- PWY-6549, L-glutamine biosynthesis III:
- 7 reactions found over 9 reactions in the full pathway
- PWY-6728, methylaspartate cycle:
- 9 reactions found over 19 reactions in the full pathway
- P23-PWY, reductive TCA cycle I:
- 10 reactions found over 12 reactions in the full pathway
- PWY-7124, ethylene biosynthesis V (engineered):
- 7 reactions found over 8 reactions in the full pathway
- PWY-5392, reductive TCA cycle II:
- 8 reactions found over 12 reactions in the full pathway
- TCA, TCA cycle I (prokaryotic):
- 9 reactions found over 10 reactions in the full pathway
- PWY-7254, TCA cycle VII (acetate-producers):
- 8 reactions found over 9 reactions in the full pathway
- PWY-5690, TCA cycle II (plants and fungi):
- 8 reactions found over 9 reactions in the full pathway
- PWY66-398, TCA cycle III (animals):
- 8 reactions found over 11 reactions in the full pathway
- PWY-5913, partial TCA cycle (obligate autotrophs):
- 9 reactions found over 11 reactions in the full pathway
- REDCITCYC, TCA cycle VIII (Helicobacter):
- 7 reactions found over 9 reactions in the full pathway
- PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
- 9 reactions found over 12 reactions in the full pathway
- P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase):
- 8 reactions found over 11 reactions in the full pathway
- FERMENTATION-PWY, mixed acid fermentation:
- 14 reactions found over 16 reactions in the full pathway
Reconstruction information
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
External links