Difference between revisions of "FISUC RS00790"

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(Created page with "Category:reaction == Reaction RXN-11135 == * ec-number: ** [http://enzyme.expasy.org/EC/5.6.2.d ec-5.6.2.d] * direction: ** left-to-right == Reaction formula == * 1 [[ATP]...")
(Created page with "Category:reaction == Reaction RXN-16380 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11135 ==
+
== Reaction RXN-16380 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.6.2.d ec-5.6.2.d]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** long-chain fatty acid--coa ligase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[Supercoiled-Duplex-DNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[Single-Stranded-DNAs]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[STEARIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[STEAROYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[FSU_RS14015]]
* Gene: [[FSU_RS10840]]
+
** Category: [[annotation]]
** Category: [[manual]]
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
** Category: [[orthology]]
* Gene: [[FSU_RS12975]]
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
** Category: [[manual]]
+
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
* Gene: [[FISUC_RS12045]]
* Gene: [[FSU_RS05375]]
+
** Category: [[annotation]]
** Category: [[manual]]
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS14745]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS07655]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS03265]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS05130]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: ec-number=ec-5.6.2.d}}
+
{{#set: ec-number=ec-6.2.1.3}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=7}}
+
{{#set: common-name=long-chain fatty acid--coa ligase}}
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=2}}
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction tool=pathwaytools|orthofinder}}
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome|faecalibacterium|bthetaiotaomicron}}

Revision as of 07:12, 9 October 2020

Reaction RXN-16380

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • long-chain fatty acid--coa ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5989, stearate biosynthesis II (bacteria and plants):
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links