Difference between revisions of "FSU RS06720"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6] ** [http://enzyme.expasy.org/EC/2.6.1....")
(Created page with "Category:reaction == Reaction RXN-7902 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14] * direction: ** left-to-right * common-name: ** acyl-acp thioe...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
+
== Reaction RXN-7902 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
+
** [http://enzyme.expasy.org/EC/3.1.2.14 ec-3.1.2.14]
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** branched-chain amino acid aminotransferase
+
** acyl-acp thioesterase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[ACYL-ACP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[Fatty-Acids]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS03245]]
+
* Gene: [[FISUC_RS01930]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS05135]]
+
* Gene: [[FISUC_RS08105]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FSU_RS10035]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
* Gene: [[FSU_RS03810]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEU-DEG2-PWY]], L-leucine degradation I:
+
* [[PWY-5142]], acyl-[acyl-carrier protein] thioesterase pathway:
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5076]], L-leucine degradation III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7767]], L-leucine degradation IV (Stickland reaction):
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-3.1.2.14}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=acyl-acp thioesterase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
+
{{#set: nb gene associated=4}}
−
* UNIPROT:
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
 
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
 
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
 
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
 
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
−
{{#set: ec-number=ec-2.6.1.42|ec-2.6.1.6}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=branched-chain amino acid aminotransferase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bifidobacterium|ecoli|faecalibacterium|genome|bthetaiotaomicron|plantarum}}
+
{{#set: reconstruction source=genome}}

Revision as of 07:12, 9 October 2020

Reaction RXN-7902

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • acyl-acp thioesterase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5142, acyl-[acyl-carrier protein] thioesterase pathway:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS06720&oldid=45526"