Difference between revisions of "FSU RS08165"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction F16BDEPHOS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.11 ec-3.1.3.11] * direction: ** left-to-right == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction RXN-11322 == * ec-number: ** [http://enzyme.expasy.org/EC/4.3.3.6 ec-4.3.3.6] * direction: ** left-to-right * synonymous: ** pyridoxal 5'-pho...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction F16BDEPHOS-RXN ==
+
== Reaction RXN-11322 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.11 ec-3.1.3.11]
+
** [http://enzyme.expasy.org/EC/4.3.3.6 ec-4.3.3.6]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** pyridoxal 5'-phosphate synthase subunit pdxs
 +
** glutamine amidotransferase subunit pdxt
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-15895]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate):
+
* [[PWY-6466]], pyridoxal 5'-phosphate biosynthesis II:
−
** '''11''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
 
−
** '''12''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY66-399]], gluconeogenesis III:
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_ibrahim_26082020]]; tool: [[curation]]; comment: added to improve flux in sugars
+
* category: [[manual]]; source: [[reactions_cmp_emile]]; tool: [[curation]]; comment: manually added by emile
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11065 11065]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31508 31508]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00762 R00762]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07456 R07456]
−
* UNIPROT:
+
{{#set: ec-number=ec-4.3.3.6}}
−
** [http://www.uniprot.org/uniprot/P09199 P09199]
 
−
** [http://www.uniprot.org/uniprot/P19112 P19112]
 
−
** [http://www.uniprot.org/uniprot/P22780 P22780]
 
−
** [http://www.uniprot.org/uniprot/P09467 P09467]
 
−
** [http://www.uniprot.org/uniprot/Q9JUL6 Q9JUL6]
 
−
** [http://www.uniprot.org/uniprot/Q9CIU9 Q9CIU9]
 
−
** [http://www.uniprot.org/uniprot/P09202 P09202]
 
−
** [http://www.uniprot.org/uniprot/Q45597 Q45597]
 
−
** [http://www.uniprot.org/uniprot/P45292 P45292]
 
−
** [http://www.uniprot.org/uniprot/Q9PP83 Q9PP83]
 
−
** [http://www.uniprot.org/uniprot/P19912 P19912]
 
−
** [http://www.uniprot.org/uniprot/P19911 P19911]
 
−
** [http://www.uniprot.org/uniprot/Q9HGZ4 Q9HGZ4]
 
−
** [http://www.uniprot.org/uniprot/P09201 P09201]
 
−
** [http://www.uniprot.org/uniprot/P0A993 P0A993]
 
−
** [http://www.uniprot.org/uniprot/P00636 P00636]
 
−
** [http://www.uniprot.org/uniprot/P23014 P23014]
 
−
** [http://www.uniprot.org/uniprot/P27994 P27994]
 
−
** [http://www.uniprot.org/uniprot/P14766 P14766]
 
−
** [http://www.uniprot.org/uniprot/P09195 P09195]
 
−
** [http://www.uniprot.org/uniprot/Q7M0S7 Q7M0S7]
 
−
** [http://www.uniprot.org/uniprot/P25851 P25851]
 
−
** [http://www.uniprot.org/uniprot/Q05079 Q05079]
 
−
** [http://www.uniprot.org/uniprot/P46275 P46275]
 
−
** [http://www.uniprot.org/uniprot/P46276 P46276]
 
−
** [http://www.uniprot.org/uniprot/Q43139 Q43139]
 
−
** [http://www.uniprot.org/uniprot/P00637 P00637]
 
−
** [http://www.uniprot.org/uniprot/O65827 O65827]
 
−
** [http://www.uniprot.org/uniprot/Q42796 Q42796]
 
−
** [http://www.uniprot.org/uniprot/P46267 P46267]
 
−
** [http://www.uniprot.org/uniprot/Q07204 Q07204]
 
−
** [http://www.uniprot.org/uniprot/P22418 P22418]
 
−
</div>
 
−
{{#set: ec-number=ec-3.1.3.11}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 +
{{#set: synonymous=glutamine amidotransferase subunit pdxt|pyridoxal 5'-phosphate synthase subunit pdxs}}
 
{{#set: nb gene associated=0}}
 
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=added to improve flux in sugars}}
+
{{#set: reconstruction comment=manually added by emile}}
−
{{#set: reconstruction source=reactions_add_ibrahim_26082020}}
+
{{#set: reconstruction source=reactions_cmp_emile}}

Revision as of 17:53, 3 November 2020

Reaction RXN-11322

  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • pyridoxal 5'-phosphate synthase subunit pdxs
    • glutamine amidotransferase subunit pdxt

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6466, pyridoxal 5'-phosphate biosynthesis II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS08165&oldid=50600"