Difference between revisions of "FSU RS04975"

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(Created page with "Category:reaction == Reaction O-SUCCHOMOSERLYASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] * direction: ** reversible == Reaction formula =...")
(Created page with "Category:reaction == Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.99.60 ec-1.14.99.60] * direction: ** left-to-rig...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction O-SUCCHOMOSERLYASE-RXN ==
+
== Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
+
** [http://enzyme.expasy.org/EC/1.14.99.60 ec-1.14.99.60]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* synonymous:
 +
** 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[Donor-H2]][c] '''+''' 1 [[OCTAPRENYL-METHYL-METHOXY-BENZQ]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS07525]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FSU_RS02705]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FSU_RS07240]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine):
+
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-801]], homocysteine and cysteine interconversion:
+
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_ibrahim_18092020]]; tool: [[curation]]; comment: to improve flux
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29404 29404]
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.14.99.60}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
+
{{#set: direction=left-to-right}}
−
* UNIPROT:
+
{{#set: synonymous=2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase}}
−
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P38675 P38675]
+
{{#set: reconstruction category=manual}}
−
** [http://www.uniprot.org/uniprot/P24601 P24601]
+
{{#set: reconstruction tool=curation}}
−
** [http://www.uniprot.org/uniprot/P00935 P00935]
+
{{#set: reconstruction comment=to improve flux}}
−
** [http://www.uniprot.org/uniprot/O04981 O04981]
+
{{#set: reconstruction source=reactions_add_ibrahim_18092020}}
−
** [http://www.uniprot.org/uniprot/O04982 O04982]
 
−
** [http://www.uniprot.org/uniprot/O81334 O81334]
 
−
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 
−
{{#set: ec-number=ec-2.5.1.48}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=ecoli|faecalibacterium|bifidobacterium}}
 

Revision as of 17:54, 3 November 2020

Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN

  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic):
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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