Difference between revisions of "FISUC RS05190"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-16626 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100] * direction: ** left-to-right * common-name: ** 3-oxoacyl-[...")
(Created page with "Category:reaction == Reaction KETOBUTFORMLY-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] * direction: ** left-to-right == Reaction formula == * 1 ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16626 ==
+
== Reaction KETOBUTFORMLY-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
 
−
** 3-oxoacyl-acp reductase fabg
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS12065]]
+
* Gene: [[FSU_RS07120]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FISUC_RS10110]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
* Gene: [[FSU_RS07105]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** Category: [[orthology]]
−
* Gene: [[FISUC_RS15070]]
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FSU_RS01260]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
+
* [[PWY-5437]], L-threonine degradation I:
−
** '''10''' reactions found over '''14''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-1.1.1.100}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28055 28055]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06987 R06987]
 +
{{#set: ec-number=ec-2.3.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-acp reductase fabg}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=bifidobacterium|ecoli|bthetaiotaomicron|faecalibacterium}}

Revision as of 17:54, 3 November 2020

Reaction KETOBUTFORMLY-RXN

  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5437, L-threonine degradation I:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS05190&oldid=50905"