Difference between revisions of "FSU RS12885"

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(Created page with "Category:reaction == Reaction RXN0-6481 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.56 ec-2.7.7.56] * direction: ** left-to-right * common-name: ** ribonuclease...")
(Created page with "Category:reaction == Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.47 ec-3.5.1.47] * direction: ** left-to-right =...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-6481 ==
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== Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.7.56 ec-2.7.7.56]
+
** [http://enzyme.expasy.org/EC/3.5.1.47 ec-3.5.1.47]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** ribonuclease ph
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2352]][c] '''+''' n [[Pi]][c] '''=>''' 1 [[CPD0-2354]][c] '''+''' 1 [[Ribonucleoside-Diphosphates]][c]
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* 1 [[CPD-1771]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[LL-DIAMINOPIMELATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS05020]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS03130]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1479]], tRNA processing:
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* [[PWY-2941]], L-lysine biosynthesis II:
** '''5''' reactions found over '''10''' reactions in the full pathway
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_ibrahim_23092020]]; tool: [[curation]]; comment: to improve flux
 
== External links  ==
 
== External links  ==
{{#set: ec-number=ec-2.7.7.56}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20406 20406]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02733 R02733]
 +
{{#set: ec-number=ec-3.5.1.47}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ribonuclease ph}}
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{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=to improve flux}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=reactions_add_ibrahim_23092020}}

Revision as of 17:54, 3 November 2020

Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links