Difference between revisions of "FSU RS03665"

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(Created page with "Category:reaction == Reaction PPENTOMUT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7] * direction: ** reversible == Reaction formula == * 1 RIB...")
(Created page with "Category:reaction == Reaction SPONTPRO-RXN == * direction: ** reversible == Reaction formula == * 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] '''+''' 1 PROTON[c] '''+'''...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction PPENTOMUT-RXN ==
+
== Reaction SPONTPRO-RXN ==
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.4.2.7 ec-5.4.2.7]
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[RIBOSE-1P]][c] '''<=>''' 1 [[RIBOSE-5P]][c]
+
* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1296]], purine ribonucleosides degradation:
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-4981]], L-proline biosynthesis II (from arginine):
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PROSYN-PWY]], L-proline biosynthesis I:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction):
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PROUT-PWY]], L-proline degradation:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7770]], indolmycin biosynthesis:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6853]], ethylene biosynthesis II (microbes):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_ibrahim_18092020]]; tool: [[curation]]; comment: to improve flux
+
* category: [[manual]]; source: [[reactions_cmp_emile]]; tool: [[curation]]; comment: present in the annotation part without gene of the emile network.
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18796 18796]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28237 28237]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01057 R01057]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03314 R03314]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9CH12 Q9CH12]
 
−
** [http://www.uniprot.org/uniprot/O24821 O24821]
 
−
** [http://www.uniprot.org/uniprot/P0A6K6 P0A6K6]
 
−
{{#set: ec-number=ec-5.4.2.7}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
 
{{#set: nb gene associated=0}}
 
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=10}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=to improve flux}}
+
{{#set: reconstruction comment=present in the annotation part without gene of the emile network.}}
−
{{#set: reconstruction source=reactions_add_ibrahim_18092020}}
+
{{#set: reconstruction source=reactions_cmp_emile}}

Revision as of 17:54, 3 November 2020

Reaction SPONTPRO-RXN

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4981, L-proline biosynthesis II (from arginine):
    • 6 reactions found over 6 reactions in the full pathway
  • PROSYN-PWY, L-proline biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway):
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction):
    • 3 reactions found over 9 reactions in the full pathway
  • PROUT-PWY, L-proline degradation:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7770, indolmycin biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6853, ethylene biosynthesis II (microbes):
    • 2 reactions found over 5 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis:
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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