Difference between revisions of "FSU RS06080"

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(Created page with "Category:reaction == Reaction RXN-18446 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1] * direction: ** left-to-right == Reaction formula == * 1 [[ATP]...")
(Created page with "Category:reaction == Reaction RXN-9531 == * common-name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase ** beta-ketoacyl-acp synthase ii * ec-number: ** [http://enzym...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-18446 ==
+
== Reaction RXN-9531 ==
 +
* common-name:
 +
** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
 +
** beta-ketoacyl-acp synthase ii
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ISOVALERATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS01410]]
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* Gene: [[FISUC_RS15410]]
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** Category: [[manual]]
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** Category: [[annotation]]
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS01400]]
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** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS15210]]
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** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS01605]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5132]], lupulone and humulone biosynthesis:
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
−
** '''1''' reactions found over '''6''' reactions in the full pathway
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** '''22''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-6.2.1.1}}
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{{#set: common-name=beta-ketoacyl-acp synthase ii|3-oxo-dodecanoyl-[acyl-carrier protein] synthase}}
 +
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=genome}}

Revision as of 17:55, 3 November 2020

Reaction RXN-9531

  • common-name:
    • 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
    • beta-ketoacyl-acp synthase ii
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis II (bacteria and plants):
    • 22 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-oxo-dodecanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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