Difference between revisions of "FISUC RS08330"

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(Created page with "Category:reaction == Reaction HOMSUCTRAN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46] * direction: ** left-to-right == Reaction formula == * 1...")
(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * common-name: ** 2-oxoglutarate dehydrogenase complex * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.m9 ec-1.2.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HOMSUCTRAN-RXN ==
+
== Reaction 2OXOGLUTARATEDEH-RXN ==
 +
* common-name:
 +
** 2-oxoglutarate dehydrogenase complex
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46]
+
** [http://enzyme.expasy.org/EC/1.2.1.m9 ec-1.2.1.m9]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* synonymous:
 +
** 2-oxoglutarate dehydrogenation
 +
** α-ketoglutarate oxidative decarboxylation
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
+
* [[TCA]], TCA cycle I (prokaryotic):
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5690]], TCA cycle II (plants and fungi):
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[reactions_add_ibrahim_24092020]]; tool: [[curation]]; comment: to improve flux
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22009 22009]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
* UNIPROT:
+
{{#set: common-name=2-oxoglutarate dehydrogenase complex}}
** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
+
{{#set: ec-number=ec-1.2.1.m9}}
** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
 
** [http://www.uniprot.org/uniprot/P07623 P07623]
 
{{#set: ec-number=ec-2.3.1.46}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 +
{{#set: synonymous=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}}
 
{{#set: nb gene associated=0}}
 
{{#set: nb gene associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=to improve flux}}
+
{{#set: reconstruction comment=added for gap-filling}}
{{#set: reconstruction source=reactions_add_ibrahim_24092020}}
+
{{#set: reconstruction source=reactions_add_gp}}

Revision as of 17:55, 3 November 2020

Reaction 2OXOGLUTARATEDEH-RXN

  • common-name:
    • 2-oxoglutarate dehydrogenase complex
  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • 2-oxoglutarate dehydrogenation
    • α-ketoglutarate oxidative decarboxylation

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TCA, TCA cycle I (prokaryotic):
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254, TCA cycle VII (acetate-producers):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5690, TCA cycle II (plants and fungi):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links