Difference between revisions of "FISUC RS03455"

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(Created page with "Category:reaction == Reaction RXN-8688 == * direction: ** left-to-right == Reaction formula == * 3 CADAVERINE[c] '''+''' 4 PYRUVATE[c] '''=>''' 1 CPD-8919[c] '...")
(Created page with "Category:reaction == Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.23 ec-2.6.1.23] * direction: ** reversible == R...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8688 ==
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== Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.6.1.23 ec-2.6.1.23]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 3 [[CADAVERINE]][c] '''+''' 4 [[PYRUVATE]][c] '''=>''' 1 [[CPD-8919]][c] '''+''' 4 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 3 [[WATER]][c]
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* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ERYTHRO-4-HYDROXY-GLUTAMATE]][c] '''<=>''' 1 [[CPD-15015]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS14145]]
 +
** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS02470]]
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS13690]]
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5468]], lupanine biosynthesis:
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* [[HYDROXYPRODEG-PWY]], trans-4-hydroxy-L-proline degradation I:
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** '''2''' reactions found over '''5''' reactions in the full pathway
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09048 R09048]
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** [http://www.genome.jp/dbget-bin/www_bget?R03266 R03266]
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-2.6.1.23}}
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{{#set: nb gene associated=0}}
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{{#set: direction=reversible}}
 +
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: reconstruction source=plantarum|bthetaiotaomicron|faecalibacterium}}

Revision as of 17:55, 3 November 2020

Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HYDROXYPRODEG-PWY, trans-4-hydroxy-L-proline degradation I:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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