Difference between revisions of "GLUTAMATE-DEHYDROGENASE-NADP+-RXN"

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(Created page with "Category:reaction == Reaction Export_ATP == * direction: ** left-to-right == Reaction formula == * 1.0 ATP[c] '''=>''' 1.0 ATP[C-BOUNDARY] == Gene(s) associated wi...")
(Created page with "Category:reaction == Reaction SUCCCOASYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.5 ec-6.2.1.5] * direction: ** reversible * synonymous: ** succinate thio...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction Export_ATP ==
+
== Reaction SUCCCOASYN-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.5 ec-6.2.1.5]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* synonymous:
 +
** succinate thiokinase
 +
** succinyl coa synthesis
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ATP]][c] '''=>''' 1.0 [[ATP]][C-BOUNDARY]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[SUC]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[P23-PWY]], reductive TCA cycle I:
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[P42-PWY]], incomplete reductive TCA cycle:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5392]], reductive TCA cycle II:
 +
** '''8''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5537]], pyruvate fermentation to acetate V:
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[TCA]], TCA cycle I (prokaryotic):
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY66-398]], TCA cycle III (animals):
 +
** '''8''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5690]], TCA cycle II (plants and fungi):
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5538]], pyruvate fermentation to acetate VI:
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6728]], methylaspartate cycle:
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_export]]; tool: [[curation]]; comment: avoid storage
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17664 17664]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00405 R00405]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O28098 O28098]
 +
** [http://www.uniprot.org/uniprot/P53594 P53594]
 +
** [http://www.uniprot.org/uniprot/O28733 O28733]
 +
** [http://www.uniprot.org/uniprot/P45101 P45101]
 +
** [http://www.uniprot.org/uniprot/P45102 P45102]
 +
** [http://www.uniprot.org/uniprot/Q9JUT0 Q9JUT0]
 +
** [http://www.uniprot.org/uniprot/Q58643 Q58643]
 +
** [http://www.uniprot.org/uniprot/O26663 O26663]
 +
** [http://www.uniprot.org/uniprot/P80886 P80886]
 +
** [http://www.uniprot.org/uniprot/Q9PHY1 Q9PHY1]
 +
** [http://www.uniprot.org/uniprot/Q9JUS9 Q9JUS9]
 +
** [http://www.uniprot.org/uniprot/P80865 P80865]
 +
** [http://www.uniprot.org/uniprot/Q9PHY0 Q9PHY0]
 +
** [http://www.uniprot.org/uniprot/O67729 O67729]
 +
** [http://www.uniprot.org/uniprot/O67546 O67546]
 +
** [http://www.uniprot.org/uniprot/P53593 P53593]
 +
** [http://www.uniprot.org/uniprot/P0AGE9 P0AGE9]
 +
** [http://www.uniprot.org/uniprot/P0A836 P0A836]
 +
** [http://www.uniprot.org/uniprot/O82662 O82662]
 +
</div>
 +
{{#set: ec-number=ec-6.2.1.5}}
 +
{{#set: direction=reversible}}
 +
{{#set: synonymous=succinate thiokinase|succinyl coa synthesis}}
 
{{#set: nb gene associated=0}}
 
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=12}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=avoid storage}}
+
{{#set: reconstruction comment=added for gap-filling}}
−
{{#set: reconstruction source=reactions_export}}
+
{{#set: reconstruction source=reactions_add_gp}}

Revision as of 19:04, 13 January 2021

Reaction SUCCCOASYN-RXN

  • ec-number:
  • direction:
    • reversible
  • synonymous:
    • succinate thiokinase
    • succinyl coa synthesis

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P23-PWY, reductive TCA cycle I:
    • 11 reactions found over 12 reactions in the full pathway
  • P42-PWY, incomplete reductive TCA cycle:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5392, reductive TCA cycle II:
    • 8 reactions found over 12 reactions in the full pathway
  • PWY-5537, pyruvate fermentation to acetate V:
    • 3 reactions found over 2 reactions in the full pathway
  • TCA, TCA cycle I (prokaryotic):
    • 10 reactions found over 10 reactions in the full pathway
  • PWY66-398, TCA cycle III (animals):
    • 8 reactions found over 11 reactions in the full pathway
  • PWY-5690, TCA cycle II (plants and fungi):
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs):
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-5538, pyruvate fermentation to acetate VI:
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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