Difference between revisions of "FISUC RS15070"

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(Created page with "Category:reaction == Reaction RXN-10061 == * common-name: ** 3-hydroxycerotyl-[acp] dehydrase ** 3-hydroxyacyl-acp dehydratase fabz * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction BADH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.8 ec-1.2.1.8] * direction: ** reversible == Reaction formula == * 1 BETAINE_...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-10061 ==
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== Reaction BADH-RXN ==
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* common-name:
 
−
** 3-hydroxycerotyl-[acp] dehydrase
 
−
** 3-hydroxyacyl-acp dehydratase fabz
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
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** [http://enzyme.expasy.org/EC/1.2.1.8 ec-1.2.1.8]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[R-3-hydroxycerotoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-hexacos-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS00310]]
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* Gene: [[FSU_RS01755]]
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** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
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* Gene: [[FISUC_RS14115]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6113]], superpathway of mycolate biosynthesis:
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria):
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** '''7''' reactions found over '''4''' reactions in the full pathway
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWYG-321]], mycolate biosynthesis:
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I:
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** '''12''' reactions found over '''182''' reactions in the full pathway
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** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7494]], choline degradation IV:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria):
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY1F-353]], glycine betaine biosynthesis III (plants):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=3-hydroxyacyl-acp dehydratase fabz|3-hydroxycerotyl-[acp] dehydrase}}
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* RHEA:
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{{#set: ec-number=ec-4.2.1.59}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
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{{#set: nb gene associated=2}}
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* LIGAND-RXN:
−
{{#set: nb pathway associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
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{{#set: reconstruction category=annotation}}
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* UNIPROT:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.uniprot.org/uniprot/P17202 P17202]
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{{#set: reconstruction comment=n.a}}
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** [http://www.uniprot.org/uniprot/P17445 P17445]
−
{{#set: reconstruction source=genome}}
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** [http://www.uniprot.org/uniprot/P28237 P28237]
 +
** [http://www.uniprot.org/uniprot/P42757 P42757]
 +
** [http://www.uniprot.org/uniprot/Q40024 Q40024]
 +
** [http://www.uniprot.org/uniprot/O24174 O24174]
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** [http://www.uniprot.org/uniprot/Q43828 Q43828]
 +
** [http://www.uniprot.org/uniprot/Q43829 Q43829]
 +
** [http://www.uniprot.org/uniprot/O22477 O22477]
 +
{{#set: ec-number=ec-1.2.1.8}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=present in the orthology part of the emile network.}}
 +
{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}

Revision as of 19:06, 13 January 2021

Reaction BADH-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • BETSYN-PWY, glycine betaine biosynthesis I (Gram-negative bacteria):
    • 1 reactions found over 2 reactions in the full pathway
  • CHOLINE-BETAINE-ANA-PWY, choline degradation I:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7494, choline degradation IV:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3722, glycine betaine biosynthesis II (Gram-positive bacteria):
    • 1 reactions found over 2 reactions in the full pathway
  • PWY1F-353, glycine betaine biosynthesis III (plants):
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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