Difference between revisions of "FSU RS01020"

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(Created page with "Category:reaction == Reaction 1.1.1.39-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38] * direction: ** left-to-right == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction HOMOSERDEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.3 ec-1.1.1.3] * direction: ** left-to-right * common-name: ** homos...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.1.1.39-RXN ==
+
== Reaction HOMOSERDEHYDROG-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.38 ec-1.1.1.38]
+
** [http://enzyme.expasy.org/EC/1.1.1.3 ec-1.1.1.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** homoserine dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HOMO-SER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS05855]]
+
* Gene: [[FISUC_RS11325]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS13290]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7686]], L-malate degradation II:
+
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-3641]], L-carnitine degradation III:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7118]], chitin degradation to ethanol:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]], gluconeogenesis I:
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12654 12654]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15759 15759]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01773 R01773]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q48662 Q48662]
+
** [http://www.uniprot.org/uniprot/P44505 P44505]
−
** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
+
** [http://www.uniprot.org/uniprot/Q58997 Q58997]
−
** [http://www.uniprot.org/uniprot/O59029 O59029]
+
** [http://www.uniprot.org/uniprot/P27725 P27725]
−
** [http://www.uniprot.org/uniprot/P16468 P16468]
+
** [http://www.uniprot.org/uniprot/O67677 O67677]
−
** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
+
** [http://www.uniprot.org/uniprot/P19582 P19582]
−
** [http://www.uniprot.org/uniprot/P26616 P26616]
+
** [http://www.uniprot.org/uniprot/P00561 P00561]
−
** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
+
** [http://www.uniprot.org/uniprot/P00562 P00562]
−
** [http://www.uniprot.org/uniprot/P37224 P37224]
+
** [http://www.uniprot.org/uniprot/P08499 P08499]
−
** [http://www.uniprot.org/uniprot/P37225 P37225]
+
** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
−
** [http://www.uniprot.org/uniprot/P37221 P37221]
+
** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
−
** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
+
** [http://www.uniprot.org/uniprot/P56429 P56429]
−
** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
+
** [http://www.uniprot.org/uniprot/O27300 O27300]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
+
** [http://www.uniprot.org/uniprot/P52985 P52985]
−
{{#set: ec-number=ec-1.1.1.38}}
+
** [http://www.uniprot.org/uniprot/P31116 P31116]
 +
** [http://www.uniprot.org/uniprot/P37142 P37142]
 +
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 +
** [http://www.uniprot.org/uniprot/P52986 P52986]
 +
** [http://www.uniprot.org/uniprot/P49079 P49079]
 +
** [http://www.uniprot.org/uniprot/P49080 P49080]
 +
** [http://www.uniprot.org/uniprot/P93402 P93402]
 +
** [http://www.uniprot.org/uniprot/O81852 O81852]
 +
** [http://www.uniprot.org/uniprot/O63067 O63067]
 +
** [http://www.uniprot.org/uniprot/O65027 O65027]
 +
** [http://www.uniprot.org/uniprot/P46806 P46806]
 +
</div>
 +
{{#set: ec-number=ec-1.1.1.3}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=homoserine dehydrogenase}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=plantarum}}
+
{{#set: reconstruction source=genome}}

Revision as of 19:07, 13 January 2021

Reaction HOMOSERDEHYDROG-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • homoserine dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSERSYN-PWY, L-homoserine biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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