Difference between revisions of "FSU RS13560"

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(Created page with "Category:reaction == Reaction RXN-14225 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right == Reaction formula == * 1 D-GL...")
(Created page with "Category:reaction == Reaction RXN-13202 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16] * direction: ** left-to-right * common-name: ** carbamoyl-pho...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14225 ==
+
== Reaction RXN-13202 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** carbamoyl-phosphate synthase large subunit
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-GLUCURONOLACTONE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[D-GLUCARATE]][c] '''+''' 1 [[NADH]][c] '''+''' 3 [[PROTON]][c]
+
* 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01755]]
+
* Gene: [[FSU_RS00955]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS00960]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS06080]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS14765]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS14770]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS04185]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-4984]], urea cycle:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O15829 O15829]
 +
** [http://www.uniprot.org/uniprot/O15830 O15830]
 +
** [http://www.uniprot.org/uniprot/P07756 P07756]
 +
** [http://www.uniprot.org/uniprot/P31327 P31327]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30886 30886]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
−
* LIGAND-RXN:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02957 R02957]
+
{{#set: ec-number=ec-6.3.4.16}}
−
{{#set: ec-number=ec-1.2.1.3}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=carbamoyl-phosphate synthase large subunit}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=6}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 19:09, 13 January 2021

Reaction RXN-13202

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • carbamoyl-phosphate synthase large subunit

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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