Difference between revisions of "FISUC RS05190"

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(Created page with "Category:reaction == Reaction KETOBUTFORMLY-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] * direction: ** left-to-right == Reaction formula == * 1 ...")
(Created page with "Category:reaction == Reaction ExchangeSeed-NADPH == * direction: ** reversible == Reaction formula == * 1.0 NADPH[C-BOUNDARY] '''<=>''' 1.0 NADPH[e] == Gene(s) ass...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction KETOBUTFORMLY-RXN ==
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== Reaction ExchangeSeed-NADPH ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
 
* direction:
 
* direction:
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** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROPIONYL-COA]][c]
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* 1.0 [[NADPH]][C-BOUNDARY] '''<=>''' 1.0 [[NADPH]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS07120]]
 
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** Category: [[orthology]]
 
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FSU_RS07105]]
 
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** Category: [[orthology]]
 
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5437]], L-threonine degradation I:
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28055 28055]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06987 R06987]
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{{#set: reconstruction category=manual}}
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{{#set: ec-number=ec-2.3.1}}
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{{#set: reconstruction tool=curation}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: nb gene associated=2}}
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{{#set: reconstruction source=import_from_medium}}
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=bifidobacterium|ecoli|bthetaiotaomicron|faecalibacterium}}
 

Revision as of 19:09, 13 January 2021

Reaction ExchangeSeed-NADPH

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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