Difference between revisions of "FSU RS12885"
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(Created page with "Category:reaction == Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.47 ec-3.5.1.47] * direction: ** left-to-right =...") |
(Created page with "Category:reaction == Reaction KETOBUTFORMLY-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] * direction: ** left-to-right == Reaction formula == * 1 ...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction KETOBUTFORMLY-RXN == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3 | + | ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROPIONYL-COA]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[FSU_RS07120]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[FSU_RS07105]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5437]], L-threonine degradation I: |
| − | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a |
| + | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28055 28055] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06987 R06987] |
| − | {{#set: ec-number=ec-3 | + | {{#set: ec-number=ec-2.3.1}} |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=orthofinder}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=bifidobacterium|ecoli|bthetaiotaomicron|faecalibacterium}} |
Revision as of 19:09, 13 January 2021
Contents
Reaction KETOBUTFORMLY-RXN
- ec-number:
- direction:
- left-to-right
Reaction formula
- 1 2-OXOBUTANOATE[c] + 1 CO-A[c] => 1 FORMATE[c] + 1 PROPIONYL-COA[c]
Gene(s) associated with this reaction
- Gene: FSU_RS07120
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: FSU_RS07105
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bifidobacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-5437, L-threonine degradation I:
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: faecalibacterium; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: orthology; source: bifidobacterium; tool: orthofinder; comment: n.a
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
External links
