Difference between revisions of "FSU RS04280"

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(Created page with "Category:reaction == Reaction TRANS-RXN-30 == * common-name: ** xylose:proton symport * direction: ** reversible == Reaction formula == * 1 D-Xylose[e] '''+''' 1 PRO...")
(Created page with "Category:reaction == Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.47 ec-3.5.1.47] * direction: ** left-to-right =...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction TRANS-RXN-30 ==
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== Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN ==
* common-name:
+
* ec-number:
** xylose:proton symport
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** [http://enzyme.expasy.org/EC/3.5.1.47 ec-3.5.1.47]
 
* direction:
 
* direction:
** reversible
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** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[D-Xylose]][e] '''+''' 1 [[PROTON]][e] '''<=>''' 1 [[D-Xylose]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-1771]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[LL-DIAMINOPIMELATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS09005]]
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
* Gene: [[FSU_RS10945]]
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2941]], L-lysine biosynthesis II:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_ibrahim_23092020]]; tool: [[curation]]; comment: to improve flux
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: common-name=xylose:proton symport}}
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* RHEA:
{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20406 20406]
{{#set: nb gene associated=2}}
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* LIGAND-RXN:
{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02733 R02733]
{{#set: reconstruction category=orthology}}
+
{{#set: ec-number=ec-3.5.1.47}}
{{#set: reconstruction tool=orthofinder}}
+
{{#set: direction=left-to-right}}
{{#set: reconstruction comment=n.a}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction source=bthetaiotaomicron|ecoli}}
+
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=to improve flux}}
 +
{{#set: reconstruction source=reactions_add_ibrahim_23092020}}

Revision as of 19:09, 13 January 2021

Reaction N-ACETYLDIAMINOPIMELATE-DEACETYLASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links