Difference between revisions of "FISUC RS11460"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-6482 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.56 ec-2.7.7.56] * direction: ** left-to-right * common-name: ** ribonuclease...")
(Created page with "Category:reaction == Reaction SUCCINYLDIAMINOPIMTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.17 ec-2.6.1.17] * direction: ** left-to-right == Reaction f...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-6482 ==
+
== Reaction SUCCINYLDIAMINOPIMTRANS-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.7.56 ec-2.7.7.56]
+
** [http://enzyme.expasy.org/EC/2.6.1.17 ec-2.6.1.17]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** ribonuclease ph
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD0-2353]][c] '''+''' n [[Pi]][c] '''=>''' n [[Ribonucleoside-Diphosphates]][c] '''+''' 1 [[tRNAs]][c]
+
* 1 [[GLT]][c] '''+''' 1 [[N-SUCCINYL-2-AMINO-6-KETOPIMELATE]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-SUCCINYLLL-2-6-DIAMINOPIMELATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS05020]]
+
* Gene: [[FSU_RS13050]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
* Gene: [[FISUC_RS03130]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1479]], tRNA processing:
+
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: ec-number=ec-2.7.7.56}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11963 11963]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04475 R04475]
 +
{{#set: ec-number=ec-2.6.1.17}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ribonuclease ph}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 19:09, 13 January 2021

Reaction SUCCINYLDIAMINOPIMTRANS-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links