Difference between revisions of "Phenols"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene FSU_RS09930 == * transcription-direction: ** positive * centisome-position: ** 62.474693 * left-end-position: ** 2400905 * right-end-position: **...") |
(Created page with "Category:gene == Gene FSU_RS01110 == * common-name: ** alr * transcription-direction: ** positive * centisome-position: ** 6.8851085 * left-end-position: ** 264595 * r...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene FSU_RS01110 == |
| + | * common-name: | ||
| + | ** alr | ||
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 6.8851085 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 264595 |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 265818 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[fibrobacter_final_03112020]] | * [[fibrobacter_final_03112020]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ALARACECAT-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * [[UDP-NACMURALGLDAPAALIG-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7383]] |
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[ALADEG-PWY]] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-8040]] | ||
** '''1''' reactions found over '''9''' reactions in the full pathway | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[ALANINE-VALINESYN-PWY]] |
| − | ** '''6''' reactions found over ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| + | * [[PWY-7953]] | ||
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6387]] | ||
| + | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: common-name=alr}} | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: centisome-position= | + | {{#set: centisome-position=6.8851085 }} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=264595}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=265818}} |
{{#set: organism associated=fibrobacter_final_03112020}} | {{#set: organism associated=fibrobacter_final_03112020}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 19:25, 13 January 2021
Contents
Gene FSU_RS01110
- common-name:
- alr
- transcription-direction:
- positive
- centisome-position:
- 6.8851085
- left-end-position:
- 264595
- right-end-position:
- 265818
Organism(s) associated with this gene
Reaction(s) associated
- ALARACECAT-RXN
- Category: annotation
- source: genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: ecoli; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- Category: annotation
- UDP-NACMURALGLDAPAALIG-RXN
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7383
- 7 reactions found over 7 reactions in the full pathway
- ALADEG-PWY
- 1 reactions found over 2 reactions in the full pathway
- PWY-8040
- 1 reactions found over 9 reactions in the full pathway
- ALANINE-VALINESYN-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-7953
- 6 reactions found over 8 reactions in the full pathway
- PWY-6387
- 8 reactions found over 8 reactions in the full pathway
