Difference between revisions of "FISUC RS07620"
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(Created page with "Category:reaction == Reaction RXN-6264 == * ec-number: ** [http://enzyme.expasy.org/EC/3.8.1.9 ec-3.8.1.9] ** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10] * directio...") |
(Created page with "Category:reaction == Reaction LIPIDXSYNTHESIS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.54 ec-3.6.1.54] * direction: ** left-to-right * common-name: ** udp...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction LIPIDXSYNTHESIS-RXN == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/3.6.1.54 ec-3.6.1.54] |
| − | |||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** udp-2,3-diacylglucosamine diphosphatase |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[OH-MYRISTOYL]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[BISOHMYR-GLUCOSAMINYL-1P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[UMP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FISUC_RS11395]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
| + | * Gene: [[FSU_RS13360]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25214 25214] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04549 R04549] |
| − | {{#set: ec-number=ec-3. | + | {{#set: ec-number=ec-3.6.1.54}} |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=udp-2,3-diacylglucosamine diphosphatase}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=orthofinder|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=genome}} | + | {{#set: reconstruction source=genome|bthetaiotaomicron|ecoli}} |
Revision as of 19:38, 13 January 2021
Contents
Reaction LIPIDXSYNTHESIS-RXN
- ec-number:
- direction:
- left-to-right
- common-name:
- udp-2,3-diacylglucosamine diphosphatase
Reaction formula
- 1 OH-MYRISTOYL[c] + 1 WATER[c] => 1 BISOHMYR-GLUCOSAMINYL-1P[c] + 2 PROTON[c] + 1 UMP[c]
Gene(s) associated with this reaction
- Gene: FISUC_RS11395
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FSU_RS13360
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- NAGLIPASYN-PWY, lipid IVA biosynthesis:
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
External links
