Difference between revisions of "FSU RS00180"

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(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-NADP+-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.3 ec-1.4.1.3] * direction: ** reversible == Reaction...")
(Created page with "Category:reaction == Reaction 2-HALOACID-DEHALOGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10] ** [http://enzyme.expasy.org/EC/3.8.1.2 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-DEHYDROGENASE-NADP+-RXN ==
+
== Reaction 2-HALOACID-DEHALOGENASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.3 ec-1.4.1.3]
+
** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10]
 +
** [http://enzyme.expasy.org/EC/3.8.1.2 ec-3.8.1.2]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** haloacid dehalogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[S-2-Haloacids]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2R-Hydroxy-Fatty-Acids]][c] '''+''' 1 [[Halide-Anions]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FISUC_RS04815]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS10270]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS12230]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUDEG-I-PWY]], GABA shunt:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5766]], L-glutamate degradation X:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLUTAMATE-SYN2-PWY]], L-glutamate biosynthesis II:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_ibrahim_03112020]]; tool: [[curation]]; comment: to improve flux in adenosylcobalamin
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11193 11193]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03830 R03830]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P49448 P49448]
+
** [http://www.uniprot.org/uniprot/P24069 P24069]
−
** [http://www.uniprot.org/uniprot/P00366 P00366]
+
** [http://www.uniprot.org/uniprot/P24070 P24070]
−
** [http://www.uniprot.org/uniprot/P00368 P00368]
+
** [http://www.uniprot.org/uniprot/Q59728 Q59728]
−
** [http://www.uniprot.org/uniprot/P00367 P00367]
+
** [http://www.uniprot.org/uniprot/Q59168 Q59168]
−
** [http://www.uniprot.org/uniprot/Q7LZR0 Q7LZR0]
+
{{#set: ec-number=ec-3.8.1.10|ec-3.8.1.2}}
−
** [http://www.uniprot.org/uniprot/P10860 P10860]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P26443 P26443]
+
{{#set: common-name=haloacid dehalogenase}}
−
** [http://www.uniprot.org/uniprot/P80053 P80053]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/Q9UWM2 Q9UWM2]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P42174 P42174]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P52596 P52596]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P96110 P96110]
+
{{#set: reconstruction comment=n.a}}
−
{{#set: ec-number=ec-1.4.1.3}}
+
{{#set: reconstruction source=genome}}
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=0}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=to improve flux in adenosylcobalamin}}
 
−
{{#set: reconstruction source=reactions_add_ibrahim_03112020}}
 

Revision as of 19:39, 13 January 2021

Reaction 2-HALOACID-DEHALOGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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