Difference between revisions of "FISUC RS15245"

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(Created page with "Category:reaction == Reaction PSERTRANSAMPYR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52] * direction: ** reversible * common-name: ** 3-phosp...")
(Created page with "Category:reaction == Reaction P-PANTOCYSDECARB-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.36 ec-4.1.1.36] * direction: ** left-to-right * common-name: ** bi...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PSERTRANSAMPYR-RXN ==
+
== Reaction P-PANTOCYSDECARB-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52]
+
** [http://enzyme.expasy.org/EC/4.1.1.36 ec-4.1.1.36]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-phosphoserine/phosphohydroxythreonine transaminase
+
** bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PANTETHEINE-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS04780]]
+
* Gene: [[FSU_RS05635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FISUC_RS03745]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS02890]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I:
+
* [[PWY-7851]], coenzyme A biosynthesis II (eukaryotic):
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[COA-PWY]], coenzyme A biosynthesis I (prokaryotic):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16576 16576]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16794 16794]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03269 R03269]
−
{{#set: ec-number=ec-2.6.1.52}}
+
{{#set: ec-number=ec-4.1.1.36}}
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-phosphoserine/phosphohydroxythreonine transaminase}}
+
{{#set: common-name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bifidobacterium|genome|faecalibacterium|bthetaiotaomicron|ecoli}}
+
{{#set: reconstruction source=genome}}

Revision as of 19:39, 13 January 2021

Reaction P-PANTOCYSDECARB-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7851, coenzyme A biosynthesis II (eukaryotic):
    • 4 reactions found over 4 reactions in the full pathway
  • COA-PWY, coenzyme A biosynthesis I (prokaryotic):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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