Difference between revisions of "FSU RS13560"

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(Created page with "Category:reaction == Reaction RXN-13202 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16] * direction: ** left-to-right * common-name: ** carbamoyl-pho...")
(Created page with "Category:reaction == Reaction RXN-11839 == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.25 ec-5.4.99.25] * direction: ** left-to-right * common-name: ** trna pseudo...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13202 ==
+
== Reaction RXN-11839 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16]
+
** [http://enzyme.expasy.org/EC/5.4.99.25 ec-5.4.99.25]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** carbamoyl-phosphate synthase large subunit
+
** trna pseudouridine(55) synthase trub
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[tRNA-uridine55]][c] '''=>''' 1 [[tRNA-pseudouridine55]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS00955]]
+
* Gene: [[FSU_RS13520]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[FSU_RS00960]]
+
* Gene: [[FISUC_RS11555]]
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FSU_RS06080]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS14765]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS14770]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS04185]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-4984]], urea cycle:
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
{{#set: ec-number=ec-5.4.99.25}}
** [http://www.uniprot.org/uniprot/O15829 O15829]
 
** [http://www.uniprot.org/uniprot/O15830 O15830]
 
** [http://www.uniprot.org/uniprot/P07756 P07756]
 
** [http://www.uniprot.org/uniprot/P31327 P31327]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
 
{{#set: ec-number=ec-6.3.4.16}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=carbamoyl-phosphate synthase large subunit}}
+
{{#set: common-name=trna pseudouridine(55) synthase trub}}
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 19:39, 13 January 2021

Reaction RXN-11839

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • trna pseudouridine(55) synthase trub

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links