Difference between revisions of "FISUC RS01785"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN0-7239 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...") |
(Created page with "Category:reaction == Reaction MALONYL-COA-ACP-TRANSACYL-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/2.3.1.85...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction MALONYL-COA-ACP-TRANSACYL-RXN == |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] |
+ | ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.39 ec-2.3.1.39] | ||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** acp s-malonyltransferase |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ACP]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MALONYL-ACP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[FSU_RS00290]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[FISUC_RS14095]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | * Gene: [[FSU_RS12070]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6799]], fatty acid biosynthesis (plant mitochondria): | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-4381]], fatty acid biosynthesis initiation I: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-8012]], mupirocin biosynthesis: | ||
+ | ** '''2''' reactions found over '''26''' reactions in the full pathway | ||
+ | * [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: ec-number=ec- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P72391 P72391] | ||
+ | ** [http://www.uniprot.org/uniprot/P49327 P49327] | ||
+ | ** [http://www.uniprot.org/uniprot/O34825 O34825] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9] | ||
+ | ** [http://www.uniprot.org/uniprot/O24916 O24916] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11] | ||
+ | ** [http://www.uniprot.org/uniprot/P43712 P43712] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1] | ||
+ | ** [http://www.uniprot.org/uniprot/O67041 O67041] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6] | ||
+ | ** [http://www.uniprot.org/uniprot/P63458 P63458] | ||
+ | ** [http://www.uniprot.org/uniprot/O84241 O84241] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5] | ||
+ | ** [http://www.uniprot.org/uniprot/P71019 P71019] | ||
+ | ** [http://www.uniprot.org/uniprot/P07149 P07149] | ||
+ | ** [http://www.uniprot.org/uniprot/P73242 P73242] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07] | ||
+ | ** [http://www.uniprot.org/uniprot/Q54205 Q54205] | ||
+ | ** [http://www.uniprot.org/uniprot/O54437 O54437] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56692 Q56692] | ||
+ | ** [http://www.uniprot.org/uniprot/O13698 O13698] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34] | ||
+ | ** [http://www.uniprot.org/uniprot/O69476 O69476] | ||
+ | ** [http://www.uniprot.org/uniprot/P12276 P12276] | ||
+ | ** [http://www.uniprot.org/uniprot/P12785 P12785] | ||
+ | </div> | ||
+ | {{#set: ec-number=ec-2.3.1.85|ec-2.3.1.39|ec-2.3.1.86}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=acp s-malonyltransferase}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|orthofinder}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=genome}} | + | {{#set: reconstruction source=genome|plantarum|faecalibacterium|bthetaiotaomicron|ecoli}} |
Revision as of 19:39, 13 January 2021
Contents
Reaction MALONYL-COA-ACP-TRANSACYL-RXN
- ec-number:
- direction:
- left-to-right
- common-name:
- acp s-malonyltransferase
Reaction formula
- 1 ACP[c] + 1 MALONYL-COA[c] => 1 CO-A[c] + 1 MALONYL-ACP[c]
Gene(s) associated with this reaction
- Gene: FSU_RS00290
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FISUC_RS14095
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FSU_RS12070
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6799, fatty acid biosynthesis (plant mitochondria):
- 1 reactions found over 4 reactions in the full pathway
- PWY-4381, fatty acid biosynthesis initiation I:
- 2 reactions found over 3 reactions in the full pathway
- PWY-8012, mupirocin biosynthesis:
- 2 reactions found over 26 reactions in the full pathway
- PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
- 6 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- category: orthology; source: faecalibacterium; tool: orthofinder; comment: n.a
- category: orthology; source: plantarum; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
External links