Difference between revisions of "FSU RS01445"
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(Created page with "Category:reaction == Reaction DIHYDRODIPICSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7] * direction: ** left-to-right * common-name: ** 4-hyd...") |
(Created page with "Category:reaction == Reaction RXN0-5462 == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1] ** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2] ** [http://...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN0-5462 == |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/4.3.3. | + | ** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1] |
+ | ** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2] | ||
+ | ** [http://enzyme.expasy.org/EC/3.6.5.3 ec-3.6.5.3] | ||
+ | ** [http://enzyme.expasy.org/EC/3.6.5.4 ec-3.6.5.4] | ||
+ | ** [http://enzyme.expasy.org/EC/3.6.5.5 ec-3.6.5.5] | ||
+ | ** [http://enzyme.expasy.org/EC/3.6.5.6 ec-3.6.5.6] | ||
+ | ** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15] | ||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** gtpase hflx |
− | * | + | ** ribosome small subunit-dependent gtpase a |
− | ** | + | ** gtpase |
− | ** | + | ** gtpase obge |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[FSU_RS01580]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FSU_RS03610]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FSU_RS03025]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FISUC_RS01145]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FISUC_RS00240]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FISUC_RS15385]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[FISUC_RS01730]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a |
+ | * Gene: [[FSU_RS02110]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
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== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
− | + | * RHEA: | |
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19670 19670] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00335 R00335] |
− | + | {{#set: ec-number=ec-3.6.5.1|ec-3.6.5.5|ec-3.6.5.4|ec-3.6.5.2|ec-3.6.5.6|ec-3.6.5.3|ec-3.6.1.15}} | |
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{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=ribosome small subunit-dependent gtpase a|gtpase hflx|gtpase obge|gtpase}} |
− | + | {{#set: nb gene associated=8}} | |
− | {{#set: nb gene associated= | + | {{#set: nb pathway associated=0}} |
− | {{#set: nb pathway associated= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction tool=orthofinder|pathwaytools}} |
− | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=genome}} | + | {{#set: reconstruction source=genome|ecoli}} |
Revision as of 19:39, 13 January 2021
Contents
Reaction RXN0-5462
- ec-number:
- direction:
- left-to-right
- common-name:
- gtpase hflx
- ribosome small subunit-dependent gtpase a
- gtpase
- gtpase obge
Reaction formula
Gene(s) associated with this reaction
- Gene: FSU_RS01580
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FSU_RS03610
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FSU_RS03025
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FISUC_RS01145
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FISUC_RS00240
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FISUC_RS15385
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FISUC_RS01730
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FSU_RS02110
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
External links