Difference between revisions of "FSU RS04505"

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(Created page with "Category:reaction == Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.52 ec-4.1.2.52] * direction: ** left-to-right * comm...")
(Created page with "Category:reaction == Reaction ASPARTATE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12] * direction: ** left-to-right * common-name:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN ==
+
== Reaction ASPARTATE--TRNA-LIGASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.52 ec-4.1.2.52]
+
** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hpch/hpai aldolase/citrate lyase family protein
+
** aspartate--trna ligase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-804]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SUCC-S-ALD]][c]
+
* 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS13400]]
+
* Gene: [[FSU_RS00430]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS15375]]
+
* Gene: [[FISUC_RS14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation:
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25789 25789]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19650 19650]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645]
+
* UNIPROT:
−
{{#set: ec-number=ec-4.1.2.52}}
+
** [http://www.uniprot.org/uniprot/P56459 P56459]
 +
** [http://www.uniprot.org/uniprot/O26328 O26328]
 +
** [http://www.uniprot.org/uniprot/O83950 O83950]
 +
** [http://www.uniprot.org/uniprot/Q58950 Q58950]
 +
** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9]
 +
** [http://www.uniprot.org/uniprot/O32038 O32038]
 +
** [http://www.uniprot.org/uniprot/O67589 O67589]
 +
** [http://www.uniprot.org/uniprot/P43817 P43817]
 +
** [http://www.uniprot.org/uniprot/O51402 O51402]
 +
** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80]
 +
** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17]
 +
** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4]
 +
** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23]
 +
** [http://www.uniprot.org/uniprot/O58776 O58776]
 +
** [http://www.uniprot.org/uniprot/O84546 O84546]
 +
** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2]
 +
** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7]
 +
** [http://www.uniprot.org/uniprot/P47282 P47282]
 +
** [http://www.uniprot.org/uniprot/Q51422 Q51422]
 +
** [http://www.uniprot.org/uniprot/Q03577 Q03577]
 +
** [http://www.uniprot.org/uniprot/P36429 P36429]
 +
** [http://www.uniprot.org/uniprot/P75068 P75068]
 +
** [http://www.uniprot.org/uniprot/P73851 P73851]
 +
** [http://www.uniprot.org/uniprot/Q48979 Q48979]
 +
** [http://www.uniprot.org/uniprot/Q49028 Q49028]
 +
** [http://www.uniprot.org/uniprot/P04802 P04802]
 +
** [http://www.uniprot.org/uniprot/P15179 P15179]
 +
** [http://www.uniprot.org/uniprot/P21889 P21889]
 +
** [http://www.uniprot.org/uniprot/P14868 P14868]
 +
** [http://www.uniprot.org/uniprot/P15178 P15178]
 +
** [http://www.uniprot.org/uniprot/O81892 O81892]
 +
** [http://www.uniprot.org/uniprot/O74407 O74407]
 +
** [http://www.uniprot.org/uniprot/O07683 O07683]
 +
</div>
 +
{{#set: ec-number=ec-6.1.1.12}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hpch/hpai aldolase/citrate lyase family protein}}
+
{{#set: common-name=aspartate--trna ligase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}

Revision as of 19:39, 13 January 2021

Reaction ASPARTATE--TRNA-LIGASE-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • aspartate--trna ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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