Difference between revisions of "FISUC RS02300"

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(Created page with "Category:reaction == Reaction 2-DEHYDROPANTOATE-REDUCT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169] * direction: ** left-to-right * common-n...")
(Created page with "Category:reaction == Reaction RXN-9527 == * common-name: ** 3-oxo-decanoyl-[acyl-carrier protein] synthase ** beta-ketoacyl-acp synthase ii * ec-number: ** [http://enzyme....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2-DEHYDROPANTOATE-REDUCT-RXN ==
+
== Reaction RXN-9527 ==
 +
* common-name:
 +
** 3-oxo-decanoyl-[acyl-carrier protein] synthase
 +
** beta-ketoacyl-acp synthase ii
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 2-dehydropantoate 2-reductase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-PANTOATE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS06490]]
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* Gene: [[FSU_RS01400]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS01605]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS15410]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS04600]]
+
* Gene: [[FISUC_RS15210]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS03445]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6654]], phosphopantothenate biosynthesis III (archaebacteria):
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
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** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''22''' reactions found over '''31''' reactions in the full pathway
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common-name=beta-ketoacyl-acp synthase ii|3-oxo-decanoyl-[acyl-carrier protein] synthase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16235 16235]
+
{{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02472 R02472]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9CFY8 Q9CFY8]
 
−
** [http://www.uniprot.org/uniprot/Q9V0N0 Q9V0N0]
 
−
{{#set: ec-number=ec-1.1.1.169}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-dehydropantoate 2-reductase}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|bthetaiotaomicron|ecoli}}
+
{{#set: reconstruction source=genome}}

Revision as of 19:39, 13 January 2021

Reaction RXN-9527

  • common-name:
    • 3-oxo-decanoyl-[acyl-carrier protein] synthase
    • beta-ketoacyl-acp synthase ii
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis II (bacteria and plants):
    • 22 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-oxo-decanoyl-[acyl-carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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